RNA id: AMCG00015613


Basic Information

Item Value
RNA id AMCG00015613
length 611
RNA type mRNA
GC content 0.56
exon number 5
gene id AMCG00015613
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 13826977 ~ 13829722 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGACTTTTTGGGTAGTACGGTGGCCTGGCCTTTCAATTCACAACATAAACACGGACCGCGTTCCCAGGAAGGACGCCATGACAGAAATATTCTCTTTGTACGGACAAAGCGATTCTCAAGGCTCCTCGGCGCTGGGCTTCGGGCCGGGGAAGCCTCCAGCCCCGCAGCCGCAGAACCAGGTGCCTATGGCGGTGCAGATCCCACCCCAGCTCGGGGATGAGGGGCCTACTCTGCGGAAACCCGCCGCAATGAACGAGCCTTTCTATTTACTGCGAGAACTGCCGGtgGGCACCGAGCTGACCGGGAACACTAACCTGATCACGCACTATAGCCTGGAGCACGCCTACAACAAGTTCTGCGGCAAGAAGGTCAAGGAGAAGCTCAGCAACTTCCTCCCAGAGCTGCCAGAGCAGTATAGACTGATGCACATCCAGCCTCCCAAGAAGAAGAGCAAACACAAGCACCGCCACCACCGCCCCCAGGACCCCTTGCCCCCTGAAACCCCCTCAGACTCGGAccacaagaagaagaagaaaaagagggaCGATGACCCCGACcgcaagaagaaaaagaaagacaagaagaagaaaaaggtgtgtttgtgtgaatga

Function

GO: NA

KEGG:

id description
K15137 MED19; mediator of RNA polymerase II transcription subunit 19

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123577 lncRNA downstream 10450 13579725 ~ 13816527 (-) False G99002
TU123572 lncRNA downstream 16082 13787907 ~ 13810895 (-) False AMCG00015606
TU123537 lncRNA downstream 92219 13728676 ~ 13734758 (-) False AMCG00015606
TU123546 lncRNA downstream 92219 13728676 ~ 13734758 (-) False AMCG00015606
TU123550 lncRNA downstream 92219 13728676 ~ 13734758 (-) False AMCG00015606
TU123614 lncRNA upstream 4795 13834517 ~ 13840231 (-) False AMCG00015612
TU123615 lncRNA upstream 4795 13834517 ~ 13840231 (-) False AMCG00015612
TU123616 lncRNA upstream 4795 13834517 ~ 13839676 (-) False AMCG00015612
TU123633 lncRNA upstream 53401 13883123 ~ 13884670 (-) True G99049
TU123635 lncRNA upstream 71634 13901356 ~ 13902314 (-) True G99051
AMCG00015604 mRNA downstream 66247 13754068 ~ 13760730 (-) True AMCG00015604
AMCG00015605 mRNA downstream 84742 13740897 ~ 13742235 (-) True AMCG00015605
AMCG00015606 mRNA downstream 88191 13722074 ~ 13738786 (-) False AMCG00015606
AMCG00015601 mRNA downstream 161200 13663657 ~ 13665777 (-) True AMCG00015601
AMCG00015603 mRNA downstream 202272 13606375 ~ 13624705 (-) True AMCG00015603
AMCG00015612 mRNA upstream 8229 13837951 ~ 13850783 (-) False AMCG00015612
AMCG00015611 mRNA upstream 36129 13865851 ~ 13869990 (-) True AMCG00015611
AMCG00015614 mRNA upstream 227617 14057339 ~ 14076142 (-) True AMCG00015614
AMCG00015615 mRNA upstream 249772 14079494 ~ 14084022 (-) True AMCG00015615
AMCG00015623 mRNA upstream 267703 14097425 ~ 14101752 (-) True AMCG00015623
TU123543 other downstream 87858 13671315 ~ 13739119 (-) True AMCG00015606
TU123499 other downstream 367188 13458127 ~ 13459789 (-) False AMCG00015598
TU122943 other downstream 2410315 11414367 ~ 11416662 (-) True G98546
TU122938 other downstream 2440778 11353783 ~ 11386199 (-) False G98543
TU122906 other downstream 2565809 11257278 ~ 11261168 (-) False AMCG00015535
TU123617 other upstream 11507 13841229 ~ 13864738 (-) False AMCG00015612
TU123618 other upstream 11507 13841229 ~ 13864738 (-) True AMCG00015612
TU123619 other upstream 11507 13841229 ~ 13864738 (-) False AMCG00015612
TU123831 other upstream 496445 14326167 ~ 14334932 (-) False AMCG00015628
TU123851 other upstream 617989 14447711 ~ 14456695 (-) True G99213

Expression Profile