Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00015617 |
| length | 1449 |
| RNA type | mRNA |
| GC content | 0.59 |
| exon number | 5 |
| gene id | AMCG00015617 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 14089967 ~ 14096267 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0009123 | nucleoside monophosphate metabolic process | biological_process |
| GO:0009124 | nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009126 | purine nucleoside monophosphate metabolic process | biological_process |
| GO:0009127 | purine nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009156 | ribonucleoside monophosphate biosynthetic process | biological_process |
| GO:0009161 | ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009167 | purine ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | biological_process |
| GO:1990351 | transporter complex | cellular_component |
| GO:0034702 | ion channel complex | cellular_component |
| GO:0034703 | cation channel complex | cellular_component |
| GO:0034704 | calcium channel complex | cellular_component |
| GO:0005891 | voltage-gated calcium channel complex | cellular_component |
| GO:1902495 | transmembrane transporter complex | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU123653 | lncRNA | upstream | 24829 | 14051495 ~ 14065138 (+) | True | G99068 |
| TU123640 | lncRNA | upstream | 156464 | 13925248 ~ 13933503 (+) | True | G99056 |
| TU123637 | lncRNA | upstream | 171939 | 13917595 ~ 13918028 (+) | True | G99053 |
| TU123465 | lncRNA | upstream | 205296 | 13881425 ~ 13884671 (+) | True | AMCG00015608 |
| TU123466 | lncRNA | upstream | 205296 | 13881425 ~ 13884671 (+) | False | AMCG00015608 |
| TU123660 | lncRNA | downstream | 678 | 14096945 ~ 14097938 (+) | False | G99074 |
| TU123661 | lncRNA | downstream | 678 | 14096945 ~ 14099137 (+) | False | G99074 |
| TU123691 | lncRNA | downstream | 30354 | 14126621 ~ 14136675 (+) | False | G99093 |
| TU123692 | lncRNA | downstream | 30354 | 14126621 ~ 14152625 (+) | True | G99093 |
| TU123727 | lncRNA | downstream | 175114 | 14271381 ~ 14425466 (+) | True | G99120 |
| AMCG00015616 | mRNA | upstream | 96878 | 13985543 ~ 13993089 (+) | True | AMCG00015616 |
| AMCG00015608 | mRNA | upstream | 205301 | 13882610 ~ 13884666 (+) | False | AMCG00015608 |
| AMCG00015610 | mRNA | upstream | 255221 | 13832595 ~ 13834746 (+) | True | AMCG00015610 |
| AMCG00015609 | mRNA | upstream | 267995 | 13802481 ~ 13821972 (+) | True | AMCG00015609 |
| AMCG00015607 | mRNA | upstream | 373145 | 13689090 ~ 13716822 (+) | True | AMCG00015607 |
| AMCG00015618 | mRNA | downstream | 8061 | 14104328 ~ 14112925 (+) | True | AMCG00015618 |
| AMCG00015619 | mRNA | downstream | 44855 | 14141122 ~ 14146970 (+) | True | AMCG00015619 |
| AMCG00015625 | mRNA | downstream | 125329 | 14221596 ~ 14234664 (+) | True | AMCG00015625 |
| AMCG00015629 | mRNA | downstream | 357250 | 14453517 ~ 14456893 (+) | True | AMCG00015629 |
| AMCG00015630 | mRNA | downstream | 366393 | 14462660 ~ 14467684 (+) | True | AMCG00015630 |
| TU123399 | other | upstream | 476675 | 13583970 ~ 13613292 (+) | False | AMCG00015602 |
| TU123395 | other | upstream | 496597 | 13576196 ~ 13593370 (+) | True | AMCG00015602 |
| TU123364 | other | upstream | 642688 | 13445525 ~ 13447279 (+) | True | G98884 |
| TU123358 | other | upstream | 652820 | 13433051 ~ 13437147 (+) | True | AMCG00015591 |
| TU123659 | other | downstream | 678 | 14096945 ~ 14100855 (+) | True | G99074 |
| TU124082 | other | downstream | 952656 | 15048923 ~ 15179850 (+) | False | AMCG00015657 |
| TU124222 | other | downstream | 1217769 | 15314036 ~ 15314414 (+) | True | G99475 |
| TU124310 | other | downstream | 1700683 | 15796950 ~ 15801634 (+) | True | G99541 |
| TU124453 | other | downstream | 2034777 | 16131044 ~ 16131387 (+) | True | G99624 |
