RNA id: AMCG00015708



Basic Information


Item Value
RNA id AMCG00015708
length 378
RNA type mRNA
GC content 0.47
exon number 3
gene id AMCG00015708
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 17281679 ~ 17300446 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAAAGATCATCTGGTGAGAGTGGCCAATGAGGCAGAGTTCATCCTCAGCAGACAGAGAGCGGAGGACATCCACAAGCATGCTGAGTTTGAGAGTTCATATCCACAAGAAACCTTGATAGAGGACCAGAATGATTTAGACAAGTTTGCTTTGGAGATTCATAACATATGCTTGCTGGACAGAATTGAGTTATCTCTGCTCCTGAGAtCGCAGAGTGCCCAGTATGCAGCAGAGAGGCGTGATGAAGAGAAAATGTGTGATCACTTGATTAGAGCAGCGAAATATCGGGACCATGTGACAGCAACCCAACTGGTCCAGAAGATCATCAACATTTTGACTGACAAGCATGGTGCCTGGGGGACCTCTGCTCTCaggtaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU124719 lncRNA upstream 210625 17070583 ~ 17071054 (+) True G99842
TU124717 lncRNA upstream 214089 17067161 ~ 17067590 (+) True G99840
TU124716 lncRNA upstream 248950 17032429 ~ 17032729 (+) True G99839
TU124713 lncRNA upstream 268638 17012662 ~ 17013041 (+) True G99836
TU124710 lncRNA upstream 275202 17005412 ~ 17006477 (+) True G99833
TU124755 lncRNA downstream 149638 17450084 ~ 17465514 (+) True G99867
TU124810 lncRNA downstream 300257 17600703 ~ 17600908 (+) True G99915
TU124831 lncRNA downstream 537171 17837617 ~ 17837900 (+) True G99933
TU124832 lncRNA downstream 632553 17932999 ~ 17933328 (+) True G99934
TU124830 lncRNA downstream 654039 17954485 ~ 17956630 (+) True G99932
AMCG00015705 mRNA upstream 45895 17186838 ~ 17235784 (+) True AMCG00015705
AMCG00015706 mRNA upstream 128201 17153275 ~ 17153478 (+) True AMCG00015706
AMCG00015703 mRNA upstream 149904 17103671 ~ 17131775 (+) True AMCG00015703
AMCG00015701 mRNA upstream 288398 16972365 ~ 16993281 (+) True AMCG00015701
AMCG00015700 mRNA upstream 411320 16835026 ~ 16870359 (+) True AMCG00015700
AMCG00015707 mRNA downstream 17847 17318293 ~ 17330594 (+) True AMCG00015707
AMCG00015710 mRNA downstream 50836 17351282 ~ 17385325 (+) True AMCG00015710
AMCG00015709 mRNA downstream 115929 17416375 ~ 17447661 (+) True AMCG00015709
AMCG00015716 mRNA downstream 590046 17890492 ~ 17919482 (+) True AMCG00015716
AMCG00015714 mRNA downstream 645043 17945489 ~ 17953069 (+) True AMCG00015714
TU124723 other upstream 149930 17098459 ~ 17131749 (+) False AMCG00015703
TU124453 other upstream 1150292 16131044 ~ 16131387 (+) True G99624
TU124310 other upstream 1480045 15796950 ~ 15801634 (+) True G99541
TU124222 other upstream 1967265 15314036 ~ 15314414 (+) True G99475
TU124082 other upstream 2101829 15048923 ~ 15179850 (+) False AMCG00015657
TU124919 other downstream 1019610 18320056 ~ 18325904 (+) True G100007
TU125009 other downstream 1444441 18744887 ~ 18771966 (+) True AMCG00015725
TU125356 other downstream 2966961 20267407 ~ 20268285 (+) True G100338
TU125724 other downstream 5379764 22680210 ~ 22680773 (+) False AMCG00015796
TU126202 other downstream 7564643 24865089 ~ 24865552 (+) True G101061

Expression Profile