RNA id: AMCG00015745



Basic Information


Item Value
RNA id AMCG00015745
length 462
RNA type mRNA
GC content 0.54
exon number 4
gene id AMCG00015745
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 19813590 ~ 19821835 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


AGGCGTCTTGGAGATGCAGCAAAGAAGGCCATCAGCAAGCTCCAAGTACGAACCATCAGGAAAGGAGACAAGGAAACTGAGTTGGATTTTGATAACTGCGCCGTTTGCATTGAAGGCTACAAACCAAATGATGTTGTGAGGATTTTACCTTGTCGGCATCTCTTCCACAAGAACTGCGTGGATCCATGGCTGCAGGACCATAGGACGTGTCCAATGTGCAAGATGAACATCCTGAAAGCTTTGGGGATTCCGCCCAACGCCGACTGTGCGGACGACATTCCACCCGACTACGAGGTGTCTATTGGGGGGCCGCCCACAAATCAGGTGACAGGTGCCAGTGACATCACGGTGAACGAGAGCTCGGTTGTGCTGGACCCTGTCGTCCGGGCCATTGGTCTGCCTCAGGTCTTCCATGACAGTGAGCTGCTGCCCCAGGCCATAGAGAACATCACCAGCACCAGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU125233 lncRNA upstream 30827 19728656 ~ 19782763 (+) False G100241
TU125235 lncRNA upstream 38300 19726572 ~ 19775290 (+) False G100241
TU125234 lncRNA upstream 83026 19726572 ~ 19730564 (+) True G100241
TU125231 lncRNA upstream 84062 19728656 ~ 19729528 (+) False G100241
TU125219 lncRNA upstream 100346 19712887 ~ 19713244 (+) True G100232
TU125368 lncRNA downstream 502775 20324610 ~ 20327167 (+) True G100349
TU125492 lncRNA downstream 957511 20779346 ~ 20780467 (+) True G100461
TU125516 lncRNA downstream 1006493 20828328 ~ 20828614 (+) True G100483
TU125537 lncRNA downstream 1242215 21064050 ~ 21065385 (+) True G100502
TU125542 lncRNA downstream 1484771 21306606 ~ 21310605 (+) True G100507
AMCG00015746 mRNA upstream 22288 19762801 ~ 19791302 (+) True AMCG00015746
AMCG00015744 mRNA upstream 108496 19704423 ~ 19705094 (+) True AMCG00015744
AMCG00015742 mRNA upstream 141694 19640046 ~ 19671896 (+) True AMCG00015742
AMCG00015741 mRNA upstream 300665 19448906 ~ 19512925 (+) True AMCG00015741
AMCG00015737 mRNA upstream 704602 19100220 ~ 19108988 (+) True AMCG00015737
AMCG00015748 mRNA downstream 46034 19867869 ~ 19905638 (+) True AMCG00015748
AMCG00015747 mRNA downstream 138709 19960544 ~ 19968342 (+) True AMCG00015747
AMCG00015756 mRNA downstream 213513 20035348 ~ 20038407 (+) True AMCG00015756
AMCG00015754 mRNA downstream 288870 20110705 ~ 20111939 (+) True AMCG00015754
AMCG00015757 mRNA downstream 314853 20136688 ~ 20145630 (+) True AMCG00015757
TU125009 other upstream 1041624 18744887 ~ 18771966 (+) True AMCG00015725
TU124919 other upstream 1487686 18320056 ~ 18325904 (+) True G100007
TU124723 other upstream 2681841 17098459 ~ 17131749 (+) False AMCG00015703
TU124453 other upstream 3682203 16131044 ~ 16131387 (+) True G99624
TU124310 other upstream 4011956 15796950 ~ 15801634 (+) True G99541
TU125356 other downstream 445572 20267407 ~ 20268285 (+) True G100338
TU125724 other downstream 2858375 22680210 ~ 22680773 (+) False AMCG00015796
TU126202 other downstream 5043254 24865089 ~ 24865552 (+) True G101061
TU126442 other downstream 6442080 26263915 ~ 26264308 (+) True G101248
TU126474 other downstream 6551318 26373153 ~ 26377699 (+) True G101275

Expression Profile