RNA id: AMCG00015759


Basic Information

Item Value
RNA id AMCG00015759
length 1527
RNA type mRNA
GC content 0.52
exon number 12
gene id AMCG00015759
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 20274943 ~ 20299858 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAAAGTGGTAAGTGGTTCACTGCAGATTGCACCAGGAGGGGGCTCAACCATAACACGGAAGTCGGGCTGCGTGTACGTCACGGTGTCACGTGGTCAGGCGGAGGCGAACACGCTAGAGACGGCTCCTCGGTTCCCAAGCATGTTGTGTATGGGAGGAAAGCTAGTGCTGTTTTTGCTGGGGCCATGGGTCTTCTGTGGTTTGTCATATGCTCAAATGGAGAGTGGAGCTGACTTTGATACTGAGGATGACTTGTATAGCAGGGAGAAGAAAATGGCTGAAGCTGATGAAGATGGGGATGGCATACTCTTGGATGACTACACTCCTCTGGATCTCCATGGGTCTAATGGTGATGCTGGGCAAATGGATGAGGAGGATGCCACCTTGCTGTTTACAGAGATGGACTCTGACTGGCATTTAACGGAAGGTGACGAGGCTGGTGCTGGTGGCCTCCCAGATGATGCTGAAGGCTCGGACTCCAAGCCTGAGGAAGAGGACCTGACCCAAGTTCCACAGCCAAGTGTCTCTTGTAGGGAGGGCCACATGTTGATCCAATTCTTGCAGCGTTACACGCAAATCTTCCTGCAGAAAGCCAGAATGAGACTACTCCCAGTTCTGAAGCTCCCCAAGTCCTGTAAGCACACTGTGAAGCAAAGCAATGGCAGCTTGGAGCTGATGGCATCCTTCAAGGGCTGCTATGTACAGACTTTGAGGAAGGACAACGGGCTTCATGCAGCACTGAACCTCCAGTACTATGACCGAGTATCGAAGAGGCAGTTTGTGACCACTGTGTCTTGCCCAGTGACCACCCCTCCAACGCCTGAACCTCCCAAAGGCCTGTCCATCTCCTGCAGTGATGCGTGCATGACTGTGCAGTTCCCTGCTGGTCCTCTGTCCGCTGTGAAAATCCTGGACTCCTCCAAAACCTTGGTCCCTGTGCTCCACACCCCCAAGGACTGTGGCTATGGCTTGGTGAAGAAGGATGGTAAGAACATCCTGACCATCCCCTACACTGCCTGTGATGTTAGGATTGTGGAGGAGAGGTACATTATCCAGGTGGCTTACTTGACTAGTGGGGGAGAGCGAGCAGAGATCCAGAGTTGGTGGCCTTATAAGGGCAACGTGCACAACGTGCAAGTCAAGAGAGATGCCATTCTGAGAGACACCCTGCAGGTTCTGAGGTCCAAGTCTGCCGTGGAATACAAACTGCCATTGCAGGTGTCATTTGAGAATGAGCCAGCCATTGACCAAGGTGGAGTGAAAAAGGAGTTCTTCTCTGTGATTTCAAGACAACTGGTTGAGAAAGGCCAGACGTTTTTCGTGGTGGATGACACTTCTGGGCTTGTTTGGTTCAAACCTGAGAACTGCAGTGACATGTACCACTTGGTAGGAATCCTGTGTGGAATGGCCTTGTACAATCACTGTGTGGCAGACCTTCATTTCCCTTCGGTGCTGTTCAAGAAGCTTCTGGCAATGGAACCAACACTGGATGACTTTCTAGAGCTGCATCCTACTCTGGGAAGGTAA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU125233 lncRNA upstream 492180 19728656 ~ 19782763 (+) False G100241
TU125235 lncRNA upstream 499653 19726572 ~ 19775290 (+) False G100241
TU125234 lncRNA upstream 544379 19726572 ~ 19730564 (+) True G100241
TU125231 lncRNA upstream 545415 19728656 ~ 19729528 (+) False G100241
TU125219 lncRNA upstream 561699 19712887 ~ 19713244 (+) True G100232
TU125368 lncRNA downstream 24752 20324610 ~ 20327167 (+) True G100349
TU125492 lncRNA downstream 479488 20779346 ~ 20780467 (+) True G100461
TU125516 lncRNA downstream 528470 20828328 ~ 20828614 (+) True G100483
TU125537 lncRNA downstream 764192 21064050 ~ 21065385 (+) True G100502
TU125542 lncRNA downstream 1006748 21306606 ~ 21310605 (+) True G100507
AMCG00015758 mRNA upstream 49854 20184189 ~ 20225089 (+) True AMCG00015758
AMCG00015757 mRNA upstream 129313 20136688 ~ 20145630 (+) True AMCG00015757
AMCG00015754 mRNA upstream 163004 20110705 ~ 20111939 (+) True AMCG00015754
AMCG00015756 mRNA upstream 236536 20035348 ~ 20038407 (+) True AMCG00015756
AMCG00015747 mRNA upstream 306601 19960544 ~ 19968342 (+) True AMCG00015747
AMCG00015765 mRNA downstream 185029 20484887 ~ 20501432 (+) True AMCG00015765
AMCG00015768 mRNA downstream 256017 20555875 ~ 20556255 (+) True AMCG00015768
AMCG00015766 mRNA downstream 287012 20586870 ~ 20619770 (+) True AMCG00015766
AMCG00015767 mRNA downstream 322935 20622793 ~ 20656527 (+) True AMCG00015767
AMCG00015773 mRNA downstream 460972 20760830 ~ 20774620 (+) True AMCG00015773
TU125356 other upstream 6658 20267407 ~ 20268285 (+) True G100338
TU125009 other upstream 1502977 18744887 ~ 18771966 (+) True AMCG00015725
TU124919 other upstream 1949039 18320056 ~ 18325904 (+) True G100007
TU124723 other upstream 3143194 17098459 ~ 17131749 (+) False AMCG00015703
TU124453 other upstream 4143556 16131044 ~ 16131387 (+) True G99624
TU125724 other downstream 2380352 22680210 ~ 22680773 (+) False AMCG00015796
TU126202 other downstream 4565231 24865089 ~ 24865552 (+) True G101061
TU126442 other downstream 5964057 26263915 ~ 26264308 (+) True G101248
TU126474 other downstream 6073295 26373153 ~ 26377699 (+) True G101275
TU126639 other downstream 7590694 27890552 ~ 27992014 (+) False G101400

Expression Profile