RNA id: AMCG00015810



Basic Information


Item Value
RNA id AMCG00015810
length 303
RNA type mRNA
GC content 0.57
exon number 2
gene id AMCG00015810
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 22976920 ~ 22979992 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TCCAAAGTGAAGGCAGGGGGGGTGCGTTTCTCTGAAGAGCCTGCTGCCCCCTCCCATGTTCACTTCGATGAAAAGCTGCATGACTCTGTTGTGATGGTGATCTCAGAGCCTGATGGGAACTTCCTGGTGAAGGTTGGCTTTCTGAAGATCCAGCACAAGTACGAGATTGTGTTCACGCTGCCCGATATACCCAGTCTGGGCGACCTGTGCCCGGCGCCCGTGCCTAACCCACACCTCCGTGTCATCGACATCAAGCCTGCCGCTGAAGGTCAGTACCCAGCTCTGTCAGCACACTGGGGGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU125778 lncRNA upstream 53524 22835254 ~ 22923396 (+) True G100709
TU125775 lncRNA upstream 156217 22820501 ~ 22820703 (+) True G100707
TU125697 lncRNA upstream 527704 22446374 ~ 22449216 (+) True G100641
TU125695 lncRNA upstream 688072 22288623 ~ 22288848 (+) True G100639
TU125610 lncRNA upstream 1162205 21814371 ~ 21814715 (+) True G100568
TU125866 lncRNA downstream 236059 23216051 ~ 23218316 (+) True G100776
TU125896 lncRNA downstream 303699 23283691 ~ 23284077 (+) True G100801
TU125958 lncRNA downstream 782299 23762291 ~ 23762523 (+) True G100858
TU125964 lncRNA downstream 859806 23839798 ~ 23961637 (+) True G100863
TU126009 lncRNA downstream 1090834 24070826 ~ 24156851 (+) True G100903
AMCG00015811 mRNA upstream 18336 22948662 ~ 22958584 (+) True AMCG00015811
AMCG00015806 mRNA upstream 56481 22919180 ~ 22920439 (+) True AMCG00015806
AMCG00015807 mRNA upstream 69778 22894764 ~ 22907142 (+) True AMCG00015807
AMCG00015801 mRNA upstream 102117 22850804 ~ 22874803 (+) True AMCG00015801
AMCG00015794 mRNA upstream 209434 22758135 ~ 22767486 (+) True AMCG00015794
AMCG00015813 mRNA downstream 130280 23110272 ~ 23116783 (+) True AMCG00015813
AMCG00015817 mRNA downstream 155586 23135578 ~ 23145714 (+) True AMCG00015817
AMCG00015818 mRNA downstream 171061 23151053 ~ 23157262 (+) True AMCG00015818
AMCG00015815 mRNA downstream 195640 23175632 ~ 23180916 (+) True AMCG00015815
AMCG00015819 mRNA downstream 232688 23212680 ~ 23229248 (+) True AMCG00015819
TU125724 other upstream 296147 22680210 ~ 22680773 (+) False AMCG00015796
TU125356 other upstream 2708635 20267407 ~ 20268285 (+) True G100338
TU125009 other upstream 4204954 18744887 ~ 18771966 (+) True AMCG00015725
TU124919 other upstream 4651016 18320056 ~ 18325904 (+) True G100007
TU124723 other upstream 5845171 17098459 ~ 17131749 (+) False AMCG00015703
TU126202 other downstream 1885097 24865089 ~ 24865552 (+) True G101061
TU126442 other downstream 3283923 26263915 ~ 26264308 (+) True G101248
TU126474 other downstream 3393161 26373153 ~ 26377699 (+) True G101275
TU126639 other downstream 4910560 27890552 ~ 27992014 (+) False G101400
TU126748 other downstream 5597508 28577500 ~ 28580829 (+) True AMCG00015901

Expression Profile