Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00015937 |
| length | 918 |
| RNA type | mRNA |
| GC content | 0.61 |
| exon number | 6 |
| gene id | AMCG00015937 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 30321510 ~ 30336269 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:2001141 | regulation of RNA biosynthetic process | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003712 | transcription coregulator activity | molecular_function |
| GO:0030274 | LIM domain binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU126990 | lncRNA | upstream | 592795 | 29705977 ~ 29728715 (+) | True | G101678 |
| TU126931 | lncRNA | upstream | 725619 | 29578529 ~ 29595891 (+) | True | G101638 |
| TU126838 | lncRNA | upstream | 1135183 | 29186105 ~ 29186327 (+) | True | G101560 |
| TU126836 | lncRNA | upstream | 1138641 | 29182531 ~ 29182869 (+) | True | G101558 |
| TU126834 | lncRNA | upstream | 1144186 | 29174777 ~ 29177324 (+) | True | G101556 |
| TU127198 | lncRNA | downstream | 258809 | 30595078 ~ 30597798 (+) | True | G101848 |
| TU127199 | lncRNA | downstream | 258809 | 30595078 ~ 30641350 (+) | False | G101848 |
| TU127300 | lncRNA | downstream | 931136 | 31267405 ~ 31287766 (+) | False | G101930 |
| TU127307 | lncRNA | downstream | 936903 | 31273172 ~ 31316692 (+) | True | G101935 |
| TU127349 | lncRNA | downstream | 1337218 | 31673487 ~ 31674507 (+) | True | G101964 |
| AMCG00015940 | mRNA | upstream | 12197 | 30297468 ~ 30309313 (+) | True | AMCG00015940 |
| AMCG00015931 | mRNA | upstream | 132885 | 30183498 ~ 30188625 (+) | True | AMCG00015931 |
| AMCG00015932 | mRNA | upstream | 138137 | 30177250 ~ 30183373 (+) | True | AMCG00015932 |
| AMCG00015929 | mRNA | upstream | 167188 | 30135535 ~ 30154322 (+) | True | AMCG00015929 |
| AMCG00015930 | mRNA | upstream | 211156 | 30084009 ~ 30110354 (+) | True | AMCG00015930 |
| AMCG00015938 | mRNA | downstream | 10164 | 30346433 ~ 30349433 (+) | True | AMCG00015938 |
| AMCG00015941 | mRNA | downstream | 30951 | 30367220 ~ 30390587 (+) | True | AMCG00015941 |
| AMCG00015949 | mRNA | downstream | 628447 | 30964716 ~ 30970883 (+) | True | AMCG00015949 |
| AMCG00015953 | mRNA | downstream | 868305 | 31204574 ~ 31216097 (+) | True | AMCG00015953 |
| AMCG00015959 | mRNA | downstream | 1397498 | 31733767 ~ 31744683 (+) | False | AMCG00015959 |
| TU127075 | other | upstream | 153221 | 30166028 ~ 30168289 (+) | True | G101752 |
| TU126954 | other | upstream | 682729 | 29633438 ~ 29638781 (+) | False | AMCG00015918 |
| TU126748 | other | upstream | 1740681 | 28577500 ~ 28580829 (+) | True | AMCG00015901 |
| TU126639 | other | upstream | 2329496 | 27890552 ~ 27992014 (+) | False | G101400 |
| TU126474 | other | upstream | 3943811 | 26373153 ~ 26377699 (+) | True | G101275 |
| TU127225 | other | downstream | 467820 | 30804089 ~ 30809238 (+) | True | G101870 |
| TU127298 | other | downstream | 926192 | 31262461 ~ 31287766 (+) | True | G101930 |
| TU127369 | other | downstream | 1404259 | 31740528 ~ 31746116 (+) | False | AMCG00015959 |
| TU127368 | other | downstream | 1405965 | 31742234 ~ 31746116 (+) | True | AMCG00015959 |
| TU127412 | other | downstream | 1612206 | 31948475 ~ 31951870 (+) | True | AMCG00015966 |
