RNA id: TU118494


Basic Information

Item Value
RNA id TU118494
length 223
lncRNA type inter_gene
GC content 0.57
exon number 1
gene id G94986
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 14922 ~ 15144 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCCAGGGGAGATAggtcgtggcctactcgaacgagagagggcttcccctggtcctaatcagcctggaccaggagaaagccttcgacagagtgggccacgaatacctgcagcttgttatggagaggatgggtctcgctcttggcctgaggaaGTGGGTTAAGATCATCTACAgcggcctaagcagcagggtccttgtgaaccgccacctgaccgaACCATTTCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU118561 lncRNA downstream 275024 290168 ~ 290522 (+) True G95050
TU118566 lncRNA downstream 311032 326176 ~ 326584 (+) True G95055
TU118605 lncRNA downstream 532752 547896 ~ 548130 (+) True G95080
TU118606 lncRNA downstream 546364 561508 ~ 561839 (+) True G95081
TU118615 lncRNA downstream 573995 589139 ~ 590180 (+) True G95090
AMCG00015058 mRNA downstream 125646 140790 ~ 141803 (+) True AMCG00015058
AMCG00015067 mRNA downstream 872870 888014 ~ 894038 (+) True AMCG00015067
AMCG00015076 mRNA downstream 1472290 1487434 ~ 1489959 (+) True AMCG00015076
AMCG00015075 mRNA downstream 1494234 1509378 ~ 1517119 (+) True AMCG00015075
AMCG00015077 mRNA downstream 1504096 1519240 ~ 1538536 (+) False AMCG00015077
TU118603 other downstream 531085 546229 ~ 546745 (+) True G95078
TU118644 other downstream 863945 879089 ~ 938986 (+) True G95117
TU118826 other downstream 1567050 1582194 ~ 1596895 (+) True AMCG00015081
TU119071 other downstream 2185793 2200937 ~ 2217102 (+) True G95486
TU119235 other downstream 2642341 2657485 ~ 2658751 (+) True G95618

Expression Profile