RNA id: TU118603


Basic Information

Item Value
RNA id TU118603
length 431
RNA type TUCP
GC content 0.46
exon number 2
gene id G95078
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 546229 ~ 546745 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

catgttaatgagggaaataagtatttgatcccctatcaatcggcaagatttctggctcccaggtgtcttttatacagaagcaatcaatcaatcagattccaaactctccaccatggccaagaccaaagagctgtccaaggatgtcagggacaagattgtagacctacacaaggctggaatgggctacaagaccatcgccaagcagcttggtgagaaggtgacaacagttggtgtgattattcgcaaatggaagaaacacaaaataactgtcagtctccctcggtctggggctccatgcaagatctcacctcgtggagtttcaatgatcatgagaatggtgaggaatcagcccagaactacacgggaggatcttgttaatgatctcaaggcagctgggaccatagtcaccaagaaaacaactggtaacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU118566 lncRNA upstream 219645 326176 ~ 326584 (+) True G95055
TU118561 lncRNA upstream 255707 290168 ~ 290522 (+) True G95050
TU118494 lncRNA upstream 531085 14922 ~ 15144 (+) True G94986
TU118605 lncRNA downstream 1151 547896 ~ 548130 (+) True G95080
TU118606 lncRNA downstream 14763 561508 ~ 561839 (+) True G95081
TU118615 lncRNA downstream 42394 589139 ~ 590180 (+) True G95090
TU118638 lncRNA downstream 279056 825801 ~ 826463 (+) True G95112
TU118658 lncRNA downstream 430302 977047 ~ 980025 (+) True G95131
AMCG00015058 mRNA upstream 404426 140790 ~ 141803 (+) True AMCG00015058
AMCG00015067 mRNA downstream 341269 888014 ~ 894038 (+) True AMCG00015067
AMCG00015076 mRNA downstream 940689 1487434 ~ 1489959 (+) True AMCG00015076
AMCG00015075 mRNA downstream 962633 1509378 ~ 1517119 (+) True AMCG00015075
AMCG00015077 mRNA downstream 972495 1519240 ~ 1538536 (+) False AMCG00015077
AMCG00015079 mRNA downstream 998486 1545231 ~ 1546105 (+) True AMCG00015079
TU118644 other downstream 332344 879089 ~ 938986 (+) True G95117
TU118826 other downstream 1035449 1582194 ~ 1596895 (+) True AMCG00015081
TU119071 other downstream 1654192 2200937 ~ 2217102 (+) True G95486
TU119235 other downstream 2110740 2657485 ~ 2658751 (+) True G95618
TU119243 other downstream 2117759 2664504 ~ 2666126 (+) True G95624

Expression Profile