RNA id: TU118658



Basic Information


Item Value
RNA id TU118658
length 211
lncRNA type inter_gene
GC content 0.52
exon number 2
gene id G95131
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 977047 ~ 980025 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GTGAGGCCAGCCTCCAGTCCCTCCAGTGAAGCATCAGTCTGAAGGAGGAAGGACAAGCTGTAGTCAGCATAGCCCAGGATGGGAGCACTAATCCCCCAGTGATCACAGATGTGAAGAACATGCCTGCTCATTTGGGAAAGTCTGCAATCCTACGCTGTGAGGCCATGTCTGTGCCAACTGCCAACTTTGAGTGGTACAAGGATGATAAGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU118638 lncRNA upstream 150584 825801 ~ 826463 (+) True G95112
TU118615 lncRNA upstream 386867 589139 ~ 590180 (+) True G95090
TU118606 lncRNA upstream 415208 561508 ~ 561839 (+) True G95081
TU118605 lncRNA upstream 428917 547896 ~ 548130 (+) True G95080
TU118566 lncRNA upstream 650463 326176 ~ 326584 (+) True G95055
TU118677 lncRNA downstream 182944 1162969 ~ 1192383 (+) True G95148
TU118722 lncRNA downstream 303682 1283707 ~ 1284046 (+) True G95189
TU118723 lncRNA downstream 326772 1306797 ~ 1306997 (+) True G95190
TU118739 lncRNA downstream 367024 1347049 ~ 1354735 (+) True G95205
TU118745 lncRNA downstream 380788 1360813 ~ 1361389 (+) True G95209
AMCG00015067 mRNA upstream 83009 888014 ~ 894038 (+) True AMCG00015067
AMCG00015058 mRNA upstream 835244 140790 ~ 141803 (+) True AMCG00015058
AMCG00015076 mRNA downstream 507409 1487434 ~ 1489959 (+) True AMCG00015076
AMCG00015075 mRNA downstream 529353 1509378 ~ 1517119 (+) True AMCG00015075
AMCG00015077 mRNA downstream 539215 1519240 ~ 1538536 (+) False AMCG00015077
AMCG00015079 mRNA downstream 565206 1545231 ~ 1546105 (+) True AMCG00015079
AMCG00015081 mRNA downstream 612798 1592823 ~ 1596862 (+) False AMCG00015081
TU118644 other upstream 38061 879089 ~ 938986 (+) True G95117
TU118603 other upstream 430302 546229 ~ 546745 (+) True G95078
TU118826 other downstream 602169 1582194 ~ 1596895 (+) True AMCG00015081
TU119071 other downstream 1220912 2200937 ~ 2217102 (+) True G95486
TU119235 other downstream 1677460 2657485 ~ 2658751 (+) True G95618
TU119243 other downstream 1684479 2664504 ~ 2666126 (+) True G95624
TU119325 other downstream 1826786 2806811 ~ 2808495 (+) True G95693

Expression Profile