RNA id: TU119109


Basic Information

Item Value
RNA id TU119109
length 223
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G95514
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 2268330 ~ 2268552 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gctgcagcattttcagaagcaattacggaaagggaggaacattgtgaaatatatttgactgatgccattggacagcaagcaagtcacgtcggccgagcagcttctcagaagagacaacagagtctgagaaacgggcgccaactgcgcagagcgcgaagtatcatattaatattgttgtatcttctgctctctatccactttgtggtgacatattaagagttat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU119079 lncRNA upstream 50234 2217200 ~ 2218096 (+) False AMCG00015102
TU119080 lncRNA upstream 50234 2217200 ~ 2218096 (+) False AMCG00015102
TU119049 lncRNA upstream 136437 2130738 ~ 2131893 (+) True G95464
TU119033 lncRNA upstream 170996 2095875 ~ 2097334 (+) False AMCG00015096
TU118986 lncRNA upstream 187493 1990628 ~ 2080837 (+) False G95415
TU119115 lncRNA downstream 4742 2273294 ~ 2334520 (+) True G95516
TU119133 lncRNA downstream 82094 2350646 ~ 2351071 (+) True G95534
TU119216 lncRNA downstream 361115 2629667 ~ 2631659 (+) True G95603
TU119234 lncRNA downstream 388528 2657080 ~ 2657479 (+) True G95617
TU119257 lncRNA downstream 407920 2676472 ~ 2676725 (+) True G95635
AMCG00015103 mRNA upstream 8501 2259196 ~ 2259829 (+) True AMCG00015103
AMCG00015100 mRNA upstream 15497 2251540 ~ 2252833 (+) True AMCG00015100
AMCG00015102 mRNA upstream 40379 2217691 ~ 2227951 (+) True AMCG00015102
AMCG00015095 mRNA upstream 131046 2117020 ~ 2137284 (+) True AMCG00015095
AMCG00015096 mRNA upstream 164476 2091675 ~ 2103854 (+) True AMCG00015096
AMCG00015101 mRNA downstream 8160 2276712 ~ 2287242 (+) True AMCG00015101
AMCG00015105 mRNA downstream 185456 2454008 ~ 2461387 (+) True AMCG00015105
AMCG00015111 mRNA downstream 251772 2520324 ~ 2523197 (+) True AMCG00015111
AMCG00015115 mRNA downstream 352722 2621274 ~ 2634890 (+) True AMCG00015115
AMCG00015120 mRNA downstream 454057 2722609 ~ 2728315 (+) True AMCG00015120
TU119071 other upstream 51228 2200937 ~ 2217102 (+) True G95486
TU118826 other upstream 671435 1582194 ~ 1596895 (+) True AMCG00015081
TU118644 other upstream 1329344 879089 ~ 938986 (+) True G95117
TU118603 other upstream 1721585 546229 ~ 546745 (+) True G95078
TU119235 other downstream 388933 2657485 ~ 2658751 (+) True G95618
TU119243 other downstream 395952 2664504 ~ 2666126 (+) True G95624
TU119325 other downstream 538259 2806811 ~ 2808495 (+) True G95693
TU119344 other downstream 551915 2820467 ~ 2823760 (+) False G95704
TU119395 other downstream 696749 2965301 ~ 2967327 (+) False AMCG00015142

Expression Profile