RNA id: TU119133



Basic Information


Item Value
RNA id TU119133
length 426
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G95534
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 2350646 ~ 2351071 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TTCAACTTCAGTAGATTTGAGTTCTCCCCTAAGCACCTGATTTACTCTCCTCATTTCTTCACTgtccctttttaaatgtatgaccTCGCCTTCAAGTATCTCCATTTTTACAGTGCCCAAATCTTTCTCCCTGACTGTTTTGCAAAGACGCATTTCCAAAACATCCCGGTCCTTCAAAACTATCCTTTCATTTTCAACCGCTTTACATCTGTCATTTTGCAGACCTTTTACTTGGATCAGAGTTGTTTCCAATTCATCTTGACATTGTCTTAAATCATTTCCTAATTGCTCTCTCTGTTCAATTAAGTCCTCTTTTTCAGCATTCAACACAATGACTTGTTTTCCACAAGTATCTAGCTTTCCTTCAAATTCTAAAACCATTCCATGCAGTTTGGCTCCTTCTTCTTTCGCTTTTGCATACTTTTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU119115 lncRNA upstream 16126 2273294 ~ 2334520 (+) True G95516
TU119109 lncRNA upstream 82094 2268330 ~ 2268552 (+) True G95514
TU119079 lncRNA upstream 132550 2217200 ~ 2218096 (+) False AMCG00015102
TU119080 lncRNA upstream 132550 2217200 ~ 2218096 (+) False AMCG00015102
TU119049 lncRNA upstream 218753 2130738 ~ 2131893 (+) True G95464
TU119216 lncRNA downstream 278596 2629667 ~ 2631659 (+) True G95603
TU119234 lncRNA downstream 306009 2657080 ~ 2657479 (+) True G95617
TU119257 lncRNA downstream 325401 2676472 ~ 2676725 (+) True G95635
TU119282 lncRNA downstream 346176 2697247 ~ 2697826 (+) True G95652
TU119284 lncRNA downstream 346976 2698047 ~ 2698695 (+) True G95654
AMCG00015101 mRNA upstream 63404 2276712 ~ 2287242 (+) True AMCG00015101
AMCG00015103 mRNA upstream 90817 2259196 ~ 2259829 (+) True AMCG00015103
AMCG00015100 mRNA upstream 97813 2251540 ~ 2252833 (+) True AMCG00015100
AMCG00015102 mRNA upstream 122695 2217691 ~ 2227951 (+) True AMCG00015102
AMCG00015095 mRNA upstream 213362 2117020 ~ 2137284 (+) True AMCG00015095
AMCG00015105 mRNA downstream 102937 2454008 ~ 2461387 (+) True AMCG00015105
AMCG00015111 mRNA downstream 169253 2520324 ~ 2523197 (+) True AMCG00015111
AMCG00015115 mRNA downstream 270203 2621274 ~ 2634890 (+) True AMCG00015115
AMCG00015120 mRNA downstream 371538 2722609 ~ 2728315 (+) True AMCG00015120
AMCG00015128 mRNA downstream 501387 2852458 ~ 2857757 (+) True AMCG00015128
TU119071 other upstream 133544 2200937 ~ 2217102 (+) True G95486
TU118826 other upstream 753751 1582194 ~ 1596895 (+) True AMCG00015081
TU118644 other upstream 1411660 879089 ~ 938986 (+) True G95117
TU118603 other upstream 1803901 546229 ~ 546745 (+) True G95078
TU119235 other downstream 306414 2657485 ~ 2658751 (+) True G95618
TU119243 other downstream 313433 2664504 ~ 2666126 (+) True G95624
TU119325 other downstream 455740 2806811 ~ 2808495 (+) True G95693
TU119344 other downstream 469396 2820467 ~ 2823760 (+) False G95704
TU119395 other downstream 614230 2965301 ~ 2967327 (+) False AMCG00015142

Expression Profile