RNA id: TU119317


Basic Information

Item Value
RNA id TU119317
length 209
lncRNA type inter_gene
GC content 0.55
exon number 1
gene id G95686
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 2778936 ~ 2779144 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ccactgccctcactctcttaccttccattgactgtttttcccatctatctgtcaactgtgctaccaactctttgttctcctccctcacctcctcccttgactctctctgtcctctcacgtctcgtcctgcccgtccctcccctcctcagccttggatctctgctgttctccgctcaacccaaACTCGTCTCCACGCcaccgaacagaag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU119303 lncRNA upstream 28106 2745474 ~ 2750830 (+) True G95672
TU119299 lncRNA upstream 36686 2739888 ~ 2742250 (+) True G95669
TU119284 lncRNA upstream 80241 2698047 ~ 2698695 (+) True G95654
TU119282 lncRNA upstream 81110 2697247 ~ 2697826 (+) True G95652
TU119257 lncRNA upstream 102211 2676472 ~ 2676725 (+) True G95635
TU119323 lncRNA downstream 34557 2813701 ~ 2816214 (+) True G95692
TU119338 lncRNA downstream 41323 2820467 ~ 2823760 (+) True G95704
TU119341 lncRNA downstream 41323 2820467 ~ 2830621 (+) False G95704
TU119343 lncRNA downstream 41323 2820467 ~ 2823760 (+) False G95704
TU119346 lncRNA downstream 52606 2831750 ~ 2832761 (+) True G95706
AMCG00015120 mRNA upstream 50621 2722609 ~ 2728315 (+) True AMCG00015120
AMCG00015115 mRNA upstream 144046 2621274 ~ 2634890 (+) True AMCG00015115
AMCG00015111 mRNA upstream 255739 2520324 ~ 2523197 (+) True AMCG00015111
AMCG00015105 mRNA upstream 317549 2454008 ~ 2461387 (+) True AMCG00015105
AMCG00015101 mRNA upstream 491694 2276712 ~ 2287242 (+) True AMCG00015101
AMCG00015128 mRNA downstream 73314 2852458 ~ 2857757 (+) True AMCG00015128
AMCG00015134 mRNA downstream 152234 2931378 ~ 2933831 (+) True AMCG00015134
AMCG00015133 mRNA downstream 173599 2952743 ~ 2962840 (+) True AMCG00015133
AMCG00015142 mRNA downstream 187783 2966927 ~ 2971345 (+) True AMCG00015142
AMCG00015141 mRNA downstream 197242 2976386 ~ 2984926 (+) True AMCG00015141
TU119243 other upstream 112810 2664504 ~ 2666126 (+) True G95624
TU119235 other upstream 120185 2657485 ~ 2658751 (+) True G95618
TU119071 other upstream 561834 2200937 ~ 2217102 (+) True G95486
TU118826 other upstream 1182041 1582194 ~ 1596895 (+) True AMCG00015081
TU118644 other upstream 1839950 879089 ~ 938986 (+) True G95117
TU119325 other downstream 27667 2806811 ~ 2808495 (+) True G95693
TU119344 other downstream 41323 2820467 ~ 2823760 (+) False G95704
TU119395 other downstream 186157 2965301 ~ 2967327 (+) False AMCG00015142
TU119665 other downstream 862796 3641940 ~ 3642200 (+) True G95955
TU119711 other downstream 1190685 3969829 ~ 3971683 (+) False G95992

Expression Profile