RNA id: TU119581



Basic Information


Item Value
RNA id TU119581
length 343
lncRNA type inter_gene
GC content 0.58
exon number 2
gene id G95892
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 3399070 ~ 3466541 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


cggacagacacacaggcggACAGGGACAAtgatacagacacacaggcgGACAGGGGTACCGTCCGTGTGGAGACAGTTCAGCAGCCCCAACAGCGGCAACAGCGTCACAGACTTCATGGTGAAACCCCTTCTCTGATCTTCCGTGTCTCCGTCTGTCCCGCTCGGCGCCTCTGTCCCGCTGTCACTGTCTCAGTCTgcccctgtctctgtctctctctctctgtcagtgtcagtctgtctgtctgcctgtccttCGCgatctctgtccctgtctcagTTTGTCTCACTCTccgtgtccctctgtctctgtgtcgcACTTTTCTGTGTCTCCGTCCGTCCCGCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU119579 lncRNA upstream 3656 3393942 ~ 3395414 (+) True G95890
TU119567 lncRNA upstream 51995 3344376 ~ 3347075 (+) False G95882
TU119568 lncRNA upstream 51995 3344376 ~ 3347075 (+) True G95882
TU119559 lncRNA upstream 73500 3311918 ~ 3325570 (+) True G95878
TU119555 lncRNA upstream 94748 3302675 ~ 3304322 (+) True G95874
TU119641 lncRNA downstream 34972 3472295 ~ 3472720 (+) True G95932
TU119653 lncRNA downstream 100809 3538132 ~ 3538336 (+) True G95944
TU119660 lncRNA downstream 163806 3601129 ~ 3601385 (+) True G95950
TU119676 lncRNA downstream 234066 3671389 ~ 3671670 (+) True G95964
TU119684 lncRNA downstream 373242 3810565 ~ 3811060 (+) True G95972
AMCG00015155 mRNA upstream 103355 3284282 ~ 3295715 (+) True AMCG00015155
AMCG00015150 mRNA upstream 197967 3189566 ~ 3201103 (+) True AMCG00015150
AMCG00015151 mRNA upstream 212530 3184731 ~ 3186540 (+) True AMCG00015151
AMCG00015149 mRNA upstream 215879 3173919 ~ 3183191 (+) True AMCG00015149
AMCG00015148 mRNA upstream 225614 3170182 ~ 3173456 (+) True AMCG00015148
AMCG00015162 mRNA downstream 116921 3554244 ~ 3555842 (+) True AMCG00015162
AMCG00015166 mRNA downstream 202039 3639362 ~ 3663412 (+) True AMCG00015166
AMCG00015165 mRNA downstream 289590 3726913 ~ 3731964 (+) True AMCG00015165
AMCG00015167 mRNA downstream 316741 3754064 ~ 3756872 (+) True AMCG00015167
AMCG00015168 mRNA downstream 357143 3794466 ~ 3822463 (+) True AMCG00015168
TU119395 other upstream 431743 2965301 ~ 2967327 (+) False AMCG00015142
TU119344 other upstream 575310 2820467 ~ 2823760 (+) False G95704
TU119325 other upstream 590575 2806811 ~ 2808495 (+) True G95693
TU119243 other upstream 732944 2664504 ~ 2666126 (+) True G95624
TU119235 other upstream 740319 2657485 ~ 2658751 (+) True G95618
TU119665 other downstream 204617 3641940 ~ 3642200 (+) True G95955
TU119711 other downstream 532506 3969829 ~ 3971683 (+) False G95992
TU119757 other downstream 651878 4089201 ~ 4100140 (+) True G96030
TU120035 other downstream 1438798 4876121 ~ 4879896 (+) True G96264
TU120099 other downstream 1584043 5021366 ~ 5022052 (+) True G96317

Expression Profile