RNA id: TU119619


Basic Information

Item Value
RNA id TU119619
length 285
RNA type TUCP
GC content 0.64
exon number 2
gene id G95921
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 3349879 ~ 3350442 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCTGTACAGCTGCCTGCTCGAGCTGTGCTGCGTCATGGCCCTGATGCAGTTCCACACGGCCATGCTGCTGCTCTGCCTGCTGGAGAGGCACCTGCGCACCACCACACTgtGCTCAGTGCTGGGGTCCCGCAGGCGCGCTCTATATTGTATGTTCGTGTGCTGGGTTTTCTCAGTGCTGCTGGGGTTCACTCCTCTAATGGGCCGACTGGGAAAGGAGCCAGGTGGTGACGGTGGCTGGTCGGGGGGTCTGGACGGGCTGGGGCTTGGCGGGACCGGCAGTCGTCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU119476 lncRNA downstream 222287 3125431 ~ 3127592 (-) True G95814
TU119456 lncRNA downstream 355724 2993674 ~ 2994155 (-) True G95798
TU119442 lncRNA downstream 386534 2960335 ~ 2963345 (-) True G95786
TU119434 lncRNA downstream 404027 2943087 ~ 2945852 (-) True G95778
TU119436 lncRNA downstream 410784 2936294 ~ 2939095 (-) True G95780
TU119642 lncRNA upstream 121765 3472207 ~ 3472926 (-) True G95933
TU119672 lncRNA upstream 252162 3602604 ~ 3603677 (-) True G95960
TU119668 lncRNA upstream 267331 3617773 ~ 3618298 (-) True G95957
TU119680 lncRNA upstream 379557 3729999 ~ 3730319 (-) True G95968
TU119690 lncRNA upstream 520634 3871076 ~ 3871334 (-) True G95978
AMCG00015157 mRNA downstream 2292 3344374 ~ 3347587 (-) True AMCG00015157
AMCG00015158 mRNA downstream 36553 3303757 ~ 3313326 (-) True AMCG00015158
AMCG00015152 mRNA downstream 81118 3250981 ~ 3268761 (-) True AMCG00015152
AMCG00015153 mRNA downstream 102291 3242110 ~ 3247588 (-) True AMCG00015153
AMCG00015154 mRNA downstream 110354 3235505 ~ 3239525 (-) True AMCG00015154
AMCG00015156 mRNA upstream 1176 3351618 ~ 3358905 (-) True AMCG00015156
AMCG00015160 mRNA upstream 44445 3394887 ~ 3398152 (-) True AMCG00015160
AMCG00015159 mRNA upstream 53032 3403474 ~ 3407541 (-) True AMCG00015159
AMCG00015161 mRNA upstream 58147 3408589 ~ 3414202 (-) True AMCG00015161
AMCG00015163 mRNA upstream 66410 3416852 ~ 3464811 (-) True AMCG00015163
TU119528 other downstream 152690 3196421 ~ 3197189 (-) True G95854
TU119524 other downstream 160786 3186169 ~ 3189093 (-) True G95850
TU119447 other downstream 369471 2978197 ~ 2980408 (-) True G95791
TU119414 other downstream 458183 2888250 ~ 2891696 (-) False AMCG00015135
TU119334 other downstream 533812 2813647 ~ 2816067 (-) True G95700
TU119671 other upstream 254161 3604603 ~ 3607192 (-) False AMCG00015164
TU119841 other upstream 824437 4174879 ~ 4180441 (-) True G96094
TU119954 other upstream 1267269 4617711 ~ 4619264 (-) True G96191
TU119993 other upstream 1427951 4778393 ~ 4802904 (-) True AMCG00015203
TU120086 other upstream 1617608 4968050 ~ 4976350 (-) True AMCG00015210

Expression Profile