RNA id: TU119668



Basic Information


Item Value
RNA id TU119668
length 320
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G95957
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 3617773 ~ 3618298 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ggccactccaggacttaatgtgcttcttcttgagccactcctttgacggtggggatggtgttcttggggtcattcctcctcctccaaacacggcaagttgagttgatgccaaagagctcgattttggtctcatctgaccacaaaactttcacccagttctcctctgaatcattcagatgttcattggcaaacttcagacgggcctgtacatgtgctttcttgagcagggggaccttgcaggcgctgcaggatttcagtccttcacggcgtagtgtgttaccaattgttttcttggtgacaatggtcccagctgccttgag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU119672 lncRNA downstream 14096 3602604 ~ 3603677 (-) True G95960
TU119642 lncRNA downstream 144847 3472207 ~ 3472926 (-) True G95933
TU119476 lncRNA downstream 490181 3125431 ~ 3127592 (-) True G95814
TU119456 lncRNA downstream 623618 2993674 ~ 2994155 (-) True G95798
TU119442 lncRNA downstream 654428 2960335 ~ 2963345 (-) True G95786
TU119680 lncRNA upstream 111701 3729999 ~ 3730319 (-) True G95968
TU119690 lncRNA upstream 252778 3871076 ~ 3871334 (-) True G95978
TU119734 lncRNA upstream 283514 3901812 ~ 4037171 (-) True G96009
TU119736 lncRNA upstream 285399 3903697 ~ 4039218 (-) False G96010
TU119735 lncRNA upstream 348731 3967029 ~ 4039218 (-) True G96010
AMCG00015164 mRNA downstream 10676 3603683 ~ 3607097 (-) True AMCG00015164
AMCG00015163 mRNA downstream 152962 3416852 ~ 3464811 (-) True AMCG00015163
AMCG00015161 mRNA downstream 203571 3408589 ~ 3414202 (-) True AMCG00015161
AMCG00015159 mRNA downstream 210232 3403474 ~ 3407541 (-) True AMCG00015159
AMCG00015160 mRNA downstream 219621 3394887 ~ 3398152 (-) True AMCG00015160
AMCG00015169 mRNA upstream 197648 3815946 ~ 3825037 (-) True AMCG00015169
AMCG00015175 mRNA upstream 284530 3902828 ~ 3904532 (-) True AMCG00015175
AMCG00015174 mRNA upstream 331846 3950144 ~ 3968980 (-) True AMCG00015174
AMCG00015182 mRNA upstream 407356 4025654 ~ 4027415 (-) True AMCG00015182
AMCG00015178 mRNA upstream 419120 4037418 ~ 4039216 (-) True AMCG00015178
TU119671 other downstream 10581 3604603 ~ 3607192 (-) False AMCG00015164
TU119619 other downstream 267331 3349879 ~ 3350442 (-) True G95921
TU119528 other downstream 420584 3196421 ~ 3197189 (-) True G95854
TU119524 other downstream 428680 3186169 ~ 3189093 (-) True G95850
TU119447 other downstream 637365 2978197 ~ 2980408 (-) True G95791
TU119841 other upstream 556581 4174879 ~ 4180441 (-) True G96094
TU119954 other upstream 999413 4617711 ~ 4619264 (-) True G96191
TU119993 other upstream 1160095 4778393 ~ 4802904 (-) True AMCG00015203
TU120086 other upstream 1349752 4968050 ~ 4976350 (-) True AMCG00015210
TU120088 other upstream 1367274 4985572 ~ 5005512 (-) False AMCG00015211

Expression Profile