RNA id: TU119680



Basic Information


Item Value
RNA id TU119680
length 321
lncRNA type inter_gene
GC content 0.61
exon number 1
gene id G95968
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 3729999 ~ 3730319 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCCCATACACACTGCCCTCGCTGCCCACCTCTATCATGGACAGTTTCCCATCCACCTGCTGCCAATCCCCTGTCCCCTGGCACTGCTGTGGAGACACCCCCTTCCTCACAAAGATGTCATCGGCGGCATTCACCCCCCAGCAGCCCAGGGGCCCACAGCTGTAGTACTTGATAGTCCCCAGGAGGCCCTGCCAGGTGGTGGGGGAGCCGGGGCCCTTGTACCCCACTGTGGCCTCCTTGCCCAGGCAGTAGATTAGTTCCACAGTGCTCACCCCGGCAATGAACTGGTCACCCCCAGCATCAATCTGCTTTAGCTGACCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU119668 lncRNA downstream 111701 3617773 ~ 3618298 (-) True G95957
TU119672 lncRNA downstream 126322 3602604 ~ 3603677 (-) True G95960
TU119642 lncRNA downstream 257073 3472207 ~ 3472926 (-) True G95933
TU119476 lncRNA downstream 602407 3125431 ~ 3127592 (-) True G95814
TU119456 lncRNA downstream 735844 2993674 ~ 2994155 (-) True G95798
TU119690 lncRNA upstream 140757 3871076 ~ 3871334 (-) True G95978
TU119734 lncRNA upstream 171493 3901812 ~ 4037171 (-) True G96009
TU119736 lncRNA upstream 173378 3903697 ~ 4039218 (-) False G96010
TU119735 lncRNA upstream 236710 3967029 ~ 4039218 (-) True G96010
TU119745 lncRNA upstream 239499 3969818 ~ 3970756 (-) True G96018
AMCG00015164 mRNA downstream 122902 3603683 ~ 3607097 (-) True AMCG00015164
AMCG00015163 mRNA downstream 265188 3416852 ~ 3464811 (-) True AMCG00015163
AMCG00015161 mRNA downstream 315797 3408589 ~ 3414202 (-) True AMCG00015161
AMCG00015159 mRNA downstream 322458 3403474 ~ 3407541 (-) True AMCG00015159
AMCG00015160 mRNA downstream 331847 3394887 ~ 3398152 (-) True AMCG00015160
AMCG00015169 mRNA upstream 85627 3815946 ~ 3825037 (-) True AMCG00015169
AMCG00015175 mRNA upstream 172509 3902828 ~ 3904532 (-) True AMCG00015175
AMCG00015174 mRNA upstream 219825 3950144 ~ 3968980 (-) True AMCG00015174
AMCG00015182 mRNA upstream 295335 4025654 ~ 4027415 (-) True AMCG00015182
AMCG00015178 mRNA upstream 307099 4037418 ~ 4039216 (-) True AMCG00015178
TU119671 other downstream 122807 3604603 ~ 3607192 (-) False AMCG00015164
TU119619 other downstream 379557 3349879 ~ 3350442 (-) True G95921
TU119528 other downstream 532810 3196421 ~ 3197189 (-) True G95854
TU119524 other downstream 540906 3186169 ~ 3189093 (-) True G95850
TU119447 other downstream 749591 2978197 ~ 2980408 (-) True G95791
TU119841 other upstream 444560 4174879 ~ 4180441 (-) True G96094
TU119954 other upstream 887392 4617711 ~ 4619264 (-) True G96191
TU119993 other upstream 1048074 4778393 ~ 4802904 (-) True AMCG00015203
TU120086 other upstream 1237731 4968050 ~ 4976350 (-) True AMCG00015210
TU120088 other upstream 1255253 4985572 ~ 5005512 (-) False AMCG00015211

Expression Profile