RNA id: TU119690



Basic Information


Item Value
RNA id TU119690
length 259
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G95978
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 3871076 ~ 3871334 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


aattacactatgggaggtacagatctagatgaagtaatgcatgagaaagacctaggagtctatgtggactcctcactttctccatccaagcaatgtggggaagcaataaaaaaggcaaacagaatgttagggtatattgtcaaaagtgtagaatttaaaacaagggaagtaatgttaagactgtacaatgcgctagttagacctcatctggaatactgtgtacagttctgggctccacacttcaagaaggatattgctg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU119680 lncRNA downstream 140757 3729999 ~ 3730319 (-) True G95968
TU119668 lncRNA downstream 252778 3617773 ~ 3618298 (-) True G95957
TU119672 lncRNA downstream 267399 3602604 ~ 3603677 (-) True G95960
TU119642 lncRNA downstream 398150 3472207 ~ 3472926 (-) True G95933
TU119476 lncRNA downstream 743484 3125431 ~ 3127592 (-) True G95814
TU119734 lncRNA upstream 30478 3901812 ~ 4037171 (-) True G96009
TU119736 lncRNA upstream 32363 3903697 ~ 4039218 (-) False G96010
TU119735 lncRNA upstream 95695 3967029 ~ 4039218 (-) True G96010
TU119745 lncRNA upstream 98484 3969818 ~ 3970756 (-) True G96018
TU119835 lncRNA upstream 240922 4112256 ~ 4123963 (-) True AMCG00015180
AMCG00015169 mRNA downstream 46039 3815946 ~ 3825037 (-) True AMCG00015169
AMCG00015164 mRNA downstream 263979 3603683 ~ 3607097 (-) True AMCG00015164
AMCG00015163 mRNA downstream 406265 3416852 ~ 3464811 (-) True AMCG00015163
AMCG00015161 mRNA downstream 456874 3408589 ~ 3414202 (-) True AMCG00015161
AMCG00015159 mRNA downstream 463535 3403474 ~ 3407541 (-) True AMCG00015159
AMCG00015175 mRNA upstream 31494 3902828 ~ 3904532 (-) True AMCG00015175
AMCG00015174 mRNA upstream 78810 3950144 ~ 3968980 (-) True AMCG00015174
AMCG00015182 mRNA upstream 154320 4025654 ~ 4027415 (-) True AMCG00015182
AMCG00015178 mRNA upstream 166084 4037418 ~ 4039216 (-) True AMCG00015178
AMCG00015180 mRNA upstream 238985 4110319 ~ 4112706 (-) False AMCG00015180
TU119671 other downstream 263884 3604603 ~ 3607192 (-) False AMCG00015164
TU119619 other downstream 520634 3349879 ~ 3350442 (-) True G95921
TU119528 other downstream 673887 3196421 ~ 3197189 (-) True G95854
TU119524 other downstream 681983 3186169 ~ 3189093 (-) True G95850
TU119447 other downstream 890668 2978197 ~ 2980408 (-) True G95791
TU119841 other upstream 303545 4174879 ~ 4180441 (-) True G96094
TU119954 other upstream 746377 4617711 ~ 4619264 (-) True G96191
TU119993 other upstream 907059 4778393 ~ 4802904 (-) True AMCG00015203
TU120086 other upstream 1096716 4968050 ~ 4976350 (-) True AMCG00015210
TU120088 other upstream 1114238 4985572 ~ 5005512 (-) False AMCG00015211

Expression Profile