RNA id: TU119883



Basic Information


Item Value
RNA id TU119883
length 200
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G96132
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 4329610 ~ 4329809 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TGGGAAGGTAACTGGAGAGTGCCTGGACTGTGCCCGTGAGATTCACAGGTGTATGGGCTATGACGGGGTGGGGGCTCCACGCTCACCTGACAGGCCCTCACACTTGGCGTGGACCCAGTGGTTGCAGCTAGAGCACTGCATCATCTGGCTGTCATAGTCATTGTCTTCATAGCACTTGAAGCACATGGGGCAGTAGTTAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU119882 lncRNA downstream 212 4329096 ~ 4329398 (-) True G96131
TU119881 lncRNA downstream 8339 4321038 ~ 4321271 (-) True G96130
TU119879 lncRNA downstream 12674 4316197 ~ 4316936 (-) True G96128
TU119878 lncRNA downstream 14694 4314693 ~ 4314916 (-) True G96127
TU119876 lncRNA downstream 27670 4301632 ~ 4301940 (-) True G96125
TU119884 lncRNA upstream 2706 4332515 ~ 4332772 (-) True G96133
TU119885 lncRNA upstream 7200 4337009 ~ 4337271 (-) True G96134
TU119887 lncRNA upstream 14059 4343868 ~ 4344069 (-) True G96136
TU119901 lncRNA upstream 61031 4390840 ~ 4392980 (-) True G96148
TU119972 lncRNA upstream 339094 4668903 ~ 4669286 (-) True G96208
AMCG00015191 mRNA downstream 29407 4295433 ~ 4300203 (-) True AMCG00015191
AMCG00015192 mRNA downstream 36313 4290597 ~ 4293297 (-) True AMCG00015192
AMCG00015187 mRNA downstream 47981 4275770 ~ 4281629 (-) True AMCG00015187
AMCG00015186 mRNA downstream 72267 4256267 ~ 4257343 (-) True AMCG00015186
AMCG00015188 mRNA downstream 120081 4206275 ~ 4209529 (-) True AMCG00015188
AMCG00015194 mRNA upstream 35627 4365436 ~ 4371175 (-) True AMCG00015194
AMCG00015193 mRNA upstream 78676 4408485 ~ 4424905 (-) True AMCG00015193
AMCG00015195 mRNA upstream 106736 4436545 ~ 4452947 (-) True AMCG00015195
AMCG00015199 mRNA upstream 289555 4619364 ~ 4630222 (-) True AMCG00015199
AMCG00015202 mRNA upstream 340895 4670704 ~ 4679051 (-) True AMCG00015202
TU119841 other downstream 149169 4174879 ~ 4180441 (-) True G96094
TU119671 other downstream 722418 3604603 ~ 3607192 (-) False AMCG00015164
TU119619 other downstream 979168 3349879 ~ 3350442 (-) True G95921
TU119528 other downstream 1132421 3196421 ~ 3197189 (-) True G95854
TU119524 other downstream 1140517 3186169 ~ 3189093 (-) True G95850
TU119954 other upstream 287902 4617711 ~ 4619264 (-) True G96191
TU119993 other upstream 448584 4778393 ~ 4802904 (-) True AMCG00015203
TU120086 other upstream 638241 4968050 ~ 4976350 (-) True AMCG00015210
TU120088 other upstream 655763 4985572 ~ 5005512 (-) False AMCG00015211
TU120090 other upstream 655763 4985572 ~ 5005512 (-) False AMCG00015211

Expression Profile