RNA id: TU119884


Basic Information

Item Value
RNA id TU119884
length 258
lncRNA type inter_gene
GC content 0.62
exon number 1
gene id G96133
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 4332515 ~ 4332772 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cacacacagagagacagacagacacgagACGGGCAGAGTCAGTGACAACGCACACACTGTCCCCCTCCTCACCTCCTTGCAGTGCACCAAGTGAGTGGTGAGGGTGGAGGTGAGCAGGCATGCCAGCACCTTCTCCATGCCCCCCCTGAGCTCAGTGTTCAGcagctccctccactggctagGCTGGGACAGGCTGCAGGGCCCACAGGAGTACACCACGCTCTCCGGCAGCCTGGACAGGATCTCGTACAGGTCATC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU119883 lncRNA downstream 2706 4329610 ~ 4329809 (-) True G96132
TU119882 lncRNA downstream 3117 4329096 ~ 4329398 (-) True G96131
TU119881 lncRNA downstream 11244 4321038 ~ 4321271 (-) True G96130
TU119879 lncRNA downstream 15579 4316197 ~ 4316936 (-) True G96128
TU119878 lncRNA downstream 17599 4314693 ~ 4314916 (-) True G96127
TU119885 lncRNA upstream 4237 4337009 ~ 4337271 (-) True G96134
TU119887 lncRNA upstream 11096 4343868 ~ 4344069 (-) True G96136
TU119901 lncRNA upstream 58068 4390840 ~ 4392980 (-) True G96148
TU119972 lncRNA upstream 336131 4668903 ~ 4669286 (-) True G96208
TU120042 lncRNA upstream 549297 4882069 ~ 4889321 (-) True G96271
AMCG00015191 mRNA downstream 32312 4295433 ~ 4300203 (-) True AMCG00015191
AMCG00015192 mRNA downstream 39218 4290597 ~ 4293297 (-) True AMCG00015192
AMCG00015187 mRNA downstream 50886 4275770 ~ 4281629 (-) True AMCG00015187
AMCG00015186 mRNA downstream 75172 4256267 ~ 4257343 (-) True AMCG00015186
AMCG00015188 mRNA downstream 122986 4206275 ~ 4209529 (-) True AMCG00015188
AMCG00015194 mRNA upstream 32664 4365436 ~ 4371175 (-) True AMCG00015194
AMCG00015193 mRNA upstream 75713 4408485 ~ 4424905 (-) True AMCG00015193
AMCG00015195 mRNA upstream 103773 4436545 ~ 4452947 (-) True AMCG00015195
AMCG00015199 mRNA upstream 286592 4619364 ~ 4630222 (-) True AMCG00015199
AMCG00015202 mRNA upstream 337932 4670704 ~ 4679051 (-) True AMCG00015202
TU119841 other downstream 152074 4174879 ~ 4180441 (-) True G96094
TU119671 other downstream 725323 3604603 ~ 3607192 (-) False AMCG00015164
TU119619 other downstream 982073 3349879 ~ 3350442 (-) True G95921
TU119528 other downstream 1135326 3196421 ~ 3197189 (-) True G95854
TU119524 other downstream 1143422 3186169 ~ 3189093 (-) True G95850
TU119954 other upstream 284939 4617711 ~ 4619264 (-) True G96191
TU119993 other upstream 445621 4778393 ~ 4802904 (-) True AMCG00015203
TU120086 other upstream 635278 4968050 ~ 4976350 (-) True AMCG00015210
TU120088 other upstream 652800 4985572 ~ 5005512 (-) False AMCG00015211
TU120090 other upstream 652800 4985572 ~ 5005512 (-) False AMCG00015211

Expression Profile