Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU120329 |
| length | 1088 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G96512 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 5752168 ~ 5753255 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0031231 | intrinsic component of peroxisomal membrane | cellular_component |
| GO:0005777 | peroxisome | cellular_component |
| GO:0005778 | peroxisomal membrane | cellular_component |
| GO:0005779 | integral component of peroxisomal membrane | cellular_component |
| GO:0044438 | obsolete microbody part | cellular_component |
| GO:0044439 | obsolete peroxisomal part | cellular_component |
| GO:0031903 | microbody membrane | cellular_component |
| GO:0042579 | microbody | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU120221 | lncRNA | upstream | 286734 | 5432605 ~ 5465434 (+) | False | G96420 |
| TU120226 | lncRNA | upstream | 293120 | 5457833 ~ 5459048 (+) | True | G96424 |
| TU120178 | lncRNA | upstream | 557989 | 5193972 ~ 5194179 (+) | True | G96384 |
| TU120152 | lncRNA | upstream | 647587 | 5101088 ~ 5104581 (+) | False | AMCG00015215 |
| TU120129 | lncRNA | upstream | 674265 | 5076033 ~ 5077903 (+) | False | AMCG00015212 |
| TU120332 | lncRNA | downstream | 1828 | 5755083 ~ 5755350 (+) | True | G96513 |
| TU120367 | lncRNA | downstream | 111789 | 5865044 ~ 5919123 (+) | True | G96543 |
| TU120401 | lncRNA | downstream | 272090 | 6025345 ~ 6067602 (+) | True | G96568 |
| TU120405 | lncRNA | downstream | 298143 | 6051398 ~ 6064774 (+) | True | G96572 |
| TU120426 | lncRNA | downstream | 364360 | 6117615 ~ 6118160 (+) | True | G96591 |
| AMCG00015242 | mRNA | upstream | 30503 | 5713705 ~ 5721665 (+) | True | AMCG00015242 |
| AMCG00015235 | mRNA | upstream | 69522 | 5681003 ~ 5682646 (+) | True | AMCG00015235 |
| AMCG00015234 | mRNA | upstream | 148813 | 5597046 ~ 5603355 (+) | True | AMCG00015234 |
| AMCG00015236 | mRNA | upstream | 181813 | 5560078 ~ 5570355 (+) | True | AMCG00015236 |
| AMCG00015241 | mRNA | upstream | 192395 | 5549195 ~ 5559773 (+) | True | AMCG00015241 |
| AMCG00015246 | mRNA | downstream | 19602 | 5772857 ~ 5788371 (+) | True | AMCG00015246 |
| AMCG00015245 | mRNA | downstream | 45238 | 5798493 ~ 5810929 (+) | True | AMCG00015245 |
| AMCG00015252 | mRNA | downstream | 206427 | 5959682 ~ 5972115 (+) | True | AMCG00015252 |
| AMCG00015255 | mRNA | downstream | 252052 | 6005307 ~ 6018242 (+) | True | AMCG00015255 |
| AMCG00015253 | mRNA | downstream | 274570 | 6027825 ~ 6035491 (+) | True | AMCG00015253 |
| TU120220 | other | upstream | 288051 | 5426879 ~ 5464117 (+) | False | G96420 |
| TU120218 | other | upstream | 318146 | 5432605 ~ 5434022 (+) | True | G96420 |
| TU120210 | other | upstream | 360445 | 5388937 ~ 5391723 (+) | True | G96415 |
| TU120099 | other | upstream | 730116 | 5021366 ~ 5022052 (+) | True | G96317 |
| TU120035 | other | upstream | 872272 | 4876121 ~ 4879896 (+) | True | G96264 |
| TU120766 | other | downstream | 1244378 | 6997633 ~ 6999583 (+) | False | AMCG00015293 |
| TU120767 | other | downstream | 1244378 | 6997633 ~ 7080788 (+) | True | AMCG00015293 |
| TU120961 | other | downstream | 1662114 | 7415369 ~ 7415762 (+) | True | G97006 |
| TU121162 | other | downstream | 2197555 | 7950810 ~ 7956094 (+) | False | AMCG00015324 |
| TU121271 | other | downstream | 2320926 | 8074181 ~ 8078761 (+) | True | AMCG00015334 |
