RNA id: TU120961



Basic Information


Item Value
RNA id TU120961
length 325
RNA type TUCP
GC content 0.48
exon number 2
gene id G97006
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 7415369 ~ 7415762 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCCTTGTTACCActgtgcaggctggtggtggtggtgtaatggcctacctgagcattgtttctgaccatgtccatccctttatgaccaccatgtacccatcctctgatggctacttccagcaggataatgcaccatgtcacaaaggtcgaatcatttcaaattggtttcttgaacatgacaatgagttcactgtactaaactggcccccacagtcaccagatctcaacccaatagagcatctttgggatgtggtggaacgggagctttgtgccctggatgtgcaccccacaaatctccatcaactgcaagatgctatcctatca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU120942 lncRNA upstream 50385 7364383 ~ 7364984 (+) True G96992
TU120877 lncRNA upstream 190031 7216640 ~ 7225338 (+) True G96936
TU120852 lncRNA upstream 269165 7145951 ~ 7146204 (+) True G96915
TU120752 lncRNA upstream 493728 6917806 ~ 6921641 (+) True G96837
TU120661 lncRNA upstream 712275 6701612 ~ 6703094 (+) False G96767
TU121030 lncRNA downstream 217619 7633381 ~ 7649307 (+) True G97059
TU121042 lncRNA downstream 238362 7654124 ~ 7654649 (+) True G97071
TU121043 lncRNA downstream 241214 7656976 ~ 7657282 (+) True G97072
TU121094 lncRNA downstream 357027 7772789 ~ 7773054 (+) True G97118
TU121096 lncRNA downstream 357511 7773273 ~ 7773477 (+) True G97120
AMCG00015302 mRNA upstream 28559 7383227 ~ 7386810 (+) True AMCG00015302
AMCG00015297 mRNA upstream 142114 7259542 ~ 7273255 (+) True AMCG00015297
AMCG00015298 mRNA upstream 237539 7175335 ~ 7177830 (+) True AMCG00015298
AMCG00015290 mRNA upstream 335898 7061902 ~ 7079471 (+) True AMCG00015290
AMCG00015292 mRNA upstream 374188 7033028 ~ 7041181 (+) True AMCG00015292
AMCG00015306 mRNA downstream 46793 7462555 ~ 7473836 (+) True AMCG00015306
AMCG00015309 mRNA downstream 88769 7504531 ~ 7558297 (+) True AMCG00015309
AMCG00015307 mRNA downstream 144862 7560624 ~ 7564400 (+) True AMCG00015307
AMCG00015308 mRNA downstream 166290 7582052 ~ 7587325 (+) True AMCG00015308
AMCG00015311 mRNA downstream 283085 7698847 ~ 7708047 (+) True AMCG00015311
TU120767 other upstream 334581 6997633 ~ 7080788 (+) True AMCG00015293
TU120766 other upstream 415786 6997633 ~ 6999583 (+) False AMCG00015293
TU120220 other upstream 1951252 5426879 ~ 5464117 (+) False G96420
TU120218 other upstream 1981347 5432605 ~ 5434022 (+) True G96420
TU120210 other upstream 2023646 5388937 ~ 5391723 (+) True G96415
TU121162 other downstream 535048 7950810 ~ 7956094 (+) False AMCG00015324
TU121271 other downstream 658419 8074181 ~ 8078761 (+) True AMCG00015334
TU121298 other downstream 708846 8124608 ~ 8126457 (+) True AMCG00015343
TU121352 other downstream 817662 8233424 ~ 8294330 (+) True G97343
TU121351 other downstream 873208 8288970 ~ 8293527 (+) False AMCG00015356

Expression Profile