RNA id: TU121097



Basic Information


Item Value
RNA id TU121097
length 207
lncRNA type inter_gene
GC content 0.31
exon number 1
gene id G97121
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 7780392 ~ 7780598 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gttttgttagtgcatgatgaacagttcgttttttgtctcctaaaattacgacttctgttttgtcagaattaagcataagaaatgtttttttcatccatgttttaaCATTAAGCacattagtttttctaggtctatggtgtTGTTAAGATTTACTGACAGatttaattgtgtgtcgtctgcgtaactgtgaaagttaatattatgtcg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU121011 lncRNA downstream 160875 7497942 ~ 7619517 (-) True G97041
TU120982 lncRNA downstream 371876 7408002 ~ 7408516 (-) False AMCG00015305
TU120947 lncRNA downstream 415393 7362385 ~ 7364999 (-) True G96994
TU120944 lncRNA downstream 415393 7362490 ~ 7364999 (-) False G96994
TU120938 lncRNA downstream 429607 7350509 ~ 7350785 (-) True G96988
TU121106 lncRNA upstream 34296 7814894 ~ 7815402 (-) True G97130
TU121110 lncRNA upstream 39206 7819804 ~ 7820189 (-) True G97134
TU121210 lncRNA upstream 188999 7969597 ~ 7970757 (-) True G97221
TU121240 lncRNA upstream 220888 8001486 ~ 8016073 (-) True G97244
TU121429 lncRNA upstream 288182 8068780 ~ 8069037 (-) True G97395
AMCG00015314 mRNA downstream 23173 7748342 ~ 7757219 (-) True AMCG00015314
AMCG00015313 mRNA downstream 70124 7707910 ~ 7710268 (-) True AMCG00015313
AMCG00015305 mRNA downstream 332098 7390889 ~ 7448294 (-) True AMCG00015305
AMCG00015304 mRNA downstream 390832 7386859 ~ 7389560 (-) True AMCG00015304
AMCG00015303 mRNA downstream 482807 7294862 ~ 7297585 (-) True AMCG00015303
AMCG00015320 mRNA upstream 40596 7821194 ~ 7825760 (-) True AMCG00015320
AMCG00015321 mRNA upstream 46083 7826681 ~ 7828114 (-) True AMCG00015321
AMCG00015318 mRNA upstream 52720 7833318 ~ 7834220 (-) True AMCG00015318
AMCG00015319 mRNA upstream 76481 7857079 ~ 7861747 (-) True AMCG00015319
AMCG00015329 mRNA upstream 96836 7877434 ~ 7885936 (-) True AMCG00015329
TU120782 other downstream 858751 6917766 ~ 6921641 (-) False AMCG00015288
TU120659 other downstream 1080035 6698857 ~ 6700357 (-) True G96766
TU120625 other downstream 1395772 6377890 ~ 6384620 (-) True AMCG00015267
TU120487 other downstream 1716233 6049477 ~ 6064159 (-) False AMCG00015256
TU120336 other downstream 2023283 5755654 ~ 5757109 (-) False AMCG00015244
TU121101 other upstream 5489 7786087 ~ 7786442 (-) True G97125
TU121448 other upstream 350709 8131307 ~ 8134115 (-) False G97411
TU121510 other upstream 629389 8409987 ~ 8411882 (-) True G97455
TU121587 other upstream 760590 8541188 ~ 8543180 (-) False AMCG00015374
TU121599 other upstream 799701 8580299 ~ 8581101 (-) False AMCG00015372

Expression Profile