RNA id: TU121635


Basic Information

Item Value
RNA id TU121635
length 215
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G97560
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8692428 ~ 8692642 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CACTGAGCAAACGCTGTTATATAGACTGACAGCACAGGGCCAGGAGGGGCTGAGTTAcagctgcagagtcactgactggactggactggactgctgcagagtcactgactggactggactggactgctgtagagtcactgactggactggactggactgctgcagagtcactgactggactggactggactggaccataataataataaaaaaat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU121621 lncRNA upstream 67741 8624089 ~ 8624687 (+) False G97547
TU121620 lncRNA upstream 67952 8624089 ~ 8624476 (+) True G97547
TU121616 lncRNA upstream 76108 8613255 ~ 8616320 (+) True G97543
TU121407 lncRNA upstream 211891 8477222 ~ 8480537 (+) True G97383
TU121401 lncRNA upstream 280547 8404152 ~ 8411881 (+) False AMCG00015363
TU121670 lncRNA downstream 26599 8719241 ~ 8719562 (+) True G97588
TU121703 lncRNA downstream 84575 8777217 ~ 8779046 (+) True G97612
TU121720 lncRNA downstream 91104 8783746 ~ 8783991 (+) True G97618
TU121721 lncRNA downstream 91570 8784212 ~ 8785276 (+) True G97619
TU121722 lncRNA downstream 96918 8789560 ~ 8790667 (+) True G97620
AMCG00015376 mRNA upstream 37319 8627771 ~ 8655109 (+) True AMCG00015376
AMCG00015377 mRNA upstream 79564 8608850 ~ 8612864 (+) True AMCG00015377
AMCG00015378 mRNA upstream 95815 8591916 ~ 8596613 (+) True AMCG00015378
AMCG00015370 mRNA upstream 120363 8552798 ~ 8572065 (+) True AMCG00015370
AMCG00015368 mRNA upstream 159287 8530143 ~ 8533141 (+) False AMCG00015368
AMCG00015381 mRNA downstream 37332 8729974 ~ 8731761 (+) True AMCG00015381
AMCG00015383 mRNA downstream 43319 8735961 ~ 8742485 (+) True AMCG00015383
AMCG00015382 mRNA downstream 56245 8748887 ~ 8753046 (+) True AMCG00015382
AMCG00015391 mRNA downstream 105591 8798233 ~ 8800278 (+) True AMCG00015391
AMCG00015389 mRNA downstream 109785 8802427 ~ 8809201 (+) True AMCG00015389
TU121633 other upstream 4748 8686768 ~ 8687680 (+) True G97558
TU121580 other upstream 147646 8543324 ~ 8544782 (+) True G97513
TU121569 other upstream 159024 8529018 ~ 8533404 (+) True AMCG00015368
TU121387 other upstream 260308 8342493 ~ 8432120 (+) False AMCG00015365
TU121400 other upstream 297019 8382697 ~ 8395409 (+) False AMCG00015363
TU121740 other downstream 136094 8828736 ~ 8893016 (+) True AMCG00015397
TU121749 other downstream 184650 8877292 ~ 8883953 (+) False AMCG00015390
TU121758 other downstream 259151 8951793 ~ 8953675 (+) True AMCG00015396
TU121759 other downstream 259151 8951793 ~ 8953675 (+) False AMCG00015396
TU121760 other downstream 259151 8951793 ~ 8953675 (+) False AMCG00015396

Expression Profile