Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU121754 |
| length | 2652 |
| lncRNA type | read_through |
| GC content | 0.45 |
| exon number | 5 |
| gene id | G97640 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 8912014 ~ 8964118 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0019538 | protein metabolic process | biological_process |
| GO:0043603 | cellular amide metabolic process | biological_process |
| GO:0043604 | amide biosynthetic process | biological_process |
| GO:1901564 | organonitrogen compound metabolic process | biological_process |
| GO:1901566 | organonitrogen compound biosynthetic process | biological_process |
| GO:0009058 | biosynthetic process | biological_process |
| GO:0009059 | macromolecule biosynthetic process | biological_process |
| GO:0043043 | peptide biosynthetic process | biological_process |
| GO:1901576 | organic substance biosynthetic process | biological_process |
| GO:0006412 | translation | biological_process |
| GO:0010467 | gene expression | biological_process |
| GO:0044237 | cellular metabolic process | biological_process |
| GO:0044238 | primary metabolic process | biological_process |
| GO:0044249 | cellular biosynthetic process | biological_process |
| GO:0044260 | cellular macromolecule metabolic process | biological_process |
| GO:0044267 | cellular protein metabolic process | biological_process |
| GO:0044271 | cellular nitrogen compound biosynthetic process | biological_process |
| GO:0071704 | organic substance metabolic process | biological_process |
| GO:0006518 | peptide metabolic process | biological_process |
| GO:0043170 | macromolecule metabolic process | biological_process |
| GO:0009987 | cellular process | biological_process |
| GO:0006807 | nitrogen compound metabolic process | biological_process |
| GO:0034641 | cellular nitrogen compound metabolic process | biological_process |
| GO:0034645 | cellular macromolecule biosynthetic process | biological_process |
| GO:0044391 | ribosomal subunit | cellular_component |
| GO:1990904 | ribonucleoprotein complex | cellular_component |
| GO:0022626 | cytosolic ribosome | cellular_component |
| GO:0022627 | cytosolic small ribosomal subunit | cellular_component |
| GO:0005840 | ribosome | cellular_component |
| GO:0015935 | small ribosomal subunit | cellular_component |
| id | description |
|---|---|
| ko03010 | Ribosome |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU121722 | lncRNA | upstream | 121347 | 8789560 ~ 8790667 (+) | True | G97620 |
| TU121726 | lncRNA | upstream | 121347 | 8789690 ~ 8790667 (+) | False | G97620 |
| TU121721 | lncRNA | upstream | 126738 | 8784212 ~ 8785276 (+) | True | G97619 |
| TU121720 | lncRNA | upstream | 128023 | 8783746 ~ 8783991 (+) | True | G97618 |
| TU121703 | lncRNA | upstream | 132968 | 8777217 ~ 8779046 (+) | True | G97612 |
| TU121779 | lncRNA | downstream | 7348 | 8971466 ~ 8978004 (+) | False | AMCG00015398 |
| TU121783 | lncRNA | downstream | 19384 | 8983502 ~ 8984908 (+) | True | G97663 |
| TU121799 | lncRNA | downstream | 60527 | 9024645 ~ 9030399 (+) | True | G97676 |
| TU121804 | lncRNA | downstream | 65599 | 9029717 ~ 9032785 (+) | False | AMCG00015407 |
| TU121733 | lncRNA | downstream | 103825 | 9067943 ~ 9072295 (+) | True | G97623 |
| AMCG00015397 | mRNA | upstream | 20693 | 8886176 ~ 8891321 (+) | False | AMCG00015397 |
| AMCG00015390 | mRNA | upstream | 27117 | 8883119 ~ 8884897 (+) | True | AMCG00015390 |
| AMCG00015392 | mRNA | upstream | 80300 | 8825512 ~ 8831714 (+) | True | AMCG00015392 |
| AMCG00015389 | mRNA | upstream | 102813 | 8802427 ~ 8809201 (+) | True | AMCG00015389 |
| AMCG00015391 | mRNA | upstream | 111736 | 8798233 ~ 8800278 (+) | True | AMCG00015391 |
| AMCG00015399 | mRNA | downstream | 342 | 8964460 ~ 8965650 (+) | True | AMCG00015399 |
| AMCG00015398 | mRNA | downstream | 11224 | 8975342 ~ 8977087 (+) | True | AMCG00015398 |
| AMCG00015407 | mRNA | downstream | 65439 | 9029557 ~ 9036615 (+) | True | AMCG00015407 |
| AMCG00015406 | mRNA | downstream | 92655 | 9056773 ~ 9063476 (+) | True | AMCG00015406 |
| AMCG00015412 | mRNA | downstream | 157286 | 9121404 ~ 9124009 (+) | False | AMCG00015412 |
| TU121740 | other | upstream | 18998 | 8828736 ~ 8893016 (+) | True | AMCG00015397 |
| TU121749 | other | upstream | 28061 | 8877292 ~ 8883953 (+) | False | AMCG00015390 |
| TU121633 | other | upstream | 224334 | 8686768 ~ 8687680 (+) | True | G97558 |
| TU121580 | other | upstream | 367232 | 8543324 ~ 8544782 (+) | True | G97513 |
| TU121569 | other | upstream | 378610 | 8529018 ~ 8533404 (+) | True | AMCG00015368 |
| TU121801 | other | downstream | 65599 | 9029717 ~ 9032785 (+) | False | AMCG00015407 |
| TU122193 | other | downstream | 741979 | 9706097 ~ 9710729 (+) | True | G98000 |
| TU122222 | other | downstream | 792955 | 9757073 ~ 9758430 (+) | False | G98025 |
| TU122266 | other | downstream | 851600 | 9815718 ~ 9872005 (+) | True | G98053 |
| TU122294 | other | downstream | 965474 | 9929592 ~ 9930804 (+) | False | AMCG00015464 |
