RNA id: TU121883



Basic Information


Item Value
RNA id TU121883
length 296
lncRNA type inter_gene
GC content 0.65
exon number 2
gene id G97745
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9237833 ~ 9238342 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GGCTCGTCCACCCACTTTGAACCCCCCCTGCGAGGCGTACCTGGTGTCTTTCGTCGCCACGAAGACCACGGGGTTGGGGGCGTCACCCTGGTTGACCTTCTGCCGCTTGATGACGGACTGAGAGGTCGTCCGCATCCCTGAGGTGAACGGCCTCCCATTGGTGGAGAACTGCTGGCCAACGCCCAGCTGTCAAAGGGTCTCTTGCCCAGCAGAGAGGGGGCGCCCCGCGGCTGGGTCACCTGGTTTCGGTTGATGGGTGTCGGAGTCCCCCTGGGGGCCTTCAGCTTCAGAGGAGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU121878 lncRNA upstream 14576 9222636 ~ 9223257 (+) True G97741
TU121874 lncRNA upstream 17549 9219836 ~ 9220284 (+) True G97737
TU121733 lncRNA upstream 165538 9067943 ~ 9072295 (+) True G97623
TU121804 lncRNA upstream 205048 9029717 ~ 9032785 (+) False AMCG00015407
TU121799 lncRNA upstream 207434 9024645 ~ 9030399 (+) True G97676
TU121863 lncRNA downstream 82700 9321042 ~ 9321684 (+) True G97730
TU121911 lncRNA downstream 89294 9327636 ~ 9331026 (+) True G97770
TU121919 lncRNA downstream 107420 9345762 ~ 9347244 (+) True G97777
TU122162 lncRNA downstream 390797 9629139 ~ 9631892 (+) True AMCG00015445
TU122181 lncRNA downstream 417126 9655468 ~ 9657866 (+) True G97989
AMCG00015416 mRNA upstream 62350 9155498 ~ 9175483 (+) True AMCG00015416
AMCG00015414 mRNA upstream 98384 9139204 ~ 9139449 (+) True AMCG00015414
AMCG00015413 mRNA upstream 98908 9128035 ~ 9138925 (+) True AMCG00015413
AMCG00015412 mRNA upstream 113824 9121404 ~ 9124009 (+) False AMCG00015412
AMCG00015406 mRNA upstream 174357 9056773 ~ 9063476 (+) True AMCG00015406
AMCG00015417 mRNA downstream 19840 9258182 ~ 9261673 (+) True AMCG00015417
AMCG00015426 mRNA downstream 85213 9323555 ~ 9326614 (+) True AMCG00015426
AMCG00015425 mRNA downstream 110243 9348585 ~ 9355717 (+) True AMCG00015425
AMCG00015428 mRNA downstream 118621 9356963 ~ 9379060 (+) True AMCG00015428
AMCG00015427 mRNA downstream 145332 9383674 ~ 9387025 (+) True AMCG00015427
TU121801 other upstream 205048 9029717 ~ 9032785 (+) False AMCG00015407
TU121758 other upstream 284158 8951793 ~ 8953675 (+) True AMCG00015396
TU121759 other upstream 284158 8951793 ~ 8953675 (+) False AMCG00015396
TU121760 other upstream 284158 8951793 ~ 8953675 (+) False AMCG00015396
TU121749 other upstream 353880 8877292 ~ 8883953 (+) False AMCG00015390
TU122193 other downstream 467755 9706097 ~ 9710729 (+) True G98000
TU122222 other downstream 518731 9757073 ~ 9758430 (+) False G98025
TU122266 other downstream 577376 9815718 ~ 9872005 (+) True G98053
TU122294 other downstream 691250 9929592 ~ 9930804 (+) False AMCG00015464
TU122332 other downstream 847086 10085428 ~ 10086512 (+) False G98093

Expression Profile