RNA id: TU122192


Basic Information

Item Value
RNA id TU122192
length 313
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G97999
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9705724 ~ 9706036 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AATATTTTCGCAGTTTATtagagatatatatttataatatatacagcaaACATGATGACGCAGCGATTAAAGTAGTGATTGAAAGTGCCAATGATGACGgtcccaaaaaacaaaaatagaatttaataataataataatgatgatgattatttaaaaaacaaagaaacggCAAGAACTTCCAgctcattttacatatttatagagCGTGTGGAACAGGACATGTTAGCGCAAGTGTAGTTATGTGGGCAACAGAACACTAGAAgcagaccaaaaaaaagaacCCCTACCCCTTTAGTCTTGAGACATATGCAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU122191 lncRNA upstream 2615 9702836 ~ 9703109 (+) True G97998
TU122181 lncRNA upstream 47858 9655468 ~ 9657866 (+) True G97989
TU122162 lncRNA upstream 73832 9629139 ~ 9631892 (+) True AMCG00015445
TU121919 lncRNA upstream 358480 9345762 ~ 9347244 (+) True G97777
TU121911 lncRNA upstream 374698 9327636 ~ 9331026 (+) True G97770
TU122221 lncRNA downstream 53536 9759572 ~ 9760688 (+) True G98025
TU122272 lncRNA downstream 153062 9859098 ~ 9862136 (+) False AMCG00015456
TU122278 lncRNA downstream 172423 9878459 ~ 9879136 (+) True G98060
TU122320 lncRNA downstream 295178 10001214 ~ 10012888 (+) False AMCG00015475
TU122474 lncRNA downstream 490591 10196627 ~ 10197404 (+) True G98195
AMCG00015450 mRNA upstream 2952 9697300 ~ 9702772 (+) True AMCG00015450
AMCG00015443 mRNA upstream 61496 9643122 ~ 9644228 (+) True AMCG00015443
AMCG00015445 mRNA upstream 75938 9624589 ~ 9629786 (+) False AMCG00015445
AMCG00015444 mRNA upstream 81142 9621732 ~ 9624582 (+) True AMCG00015444
AMCG00015435 mRNA upstream 120187 9572868 ~ 9585537 (+) True AMCG00015435
AMCG00015461 mRNA downstream 66538 9772574 ~ 9810428 (+) True AMCG00015461
AMCG00015455 mRNA downstream 110095 9816131 ~ 9819910 (+) True AMCG00015455
AMCG00015457 mRNA downstream 118879 9824915 ~ 9842408 (+) True AMCG00015457
AMCG00015456 mRNA downstream 145636 9851672 ~ 9861488 (+) True AMCG00015456
AMCG00015458 mRNA downstream 157712 9863748 ~ 9868818 (+) True AMCG00015458
TU121801 other upstream 672939 9029717 ~ 9032785 (+) False AMCG00015407
TU121758 other upstream 752049 8951793 ~ 8953675 (+) True AMCG00015396
TU121759 other upstream 752049 8951793 ~ 8953675 (+) False AMCG00015396
TU121760 other upstream 752049 8951793 ~ 8953675 (+) False AMCG00015396
TU121749 other upstream 821771 8877292 ~ 8883953 (+) False AMCG00015390
TU122193 other downstream 61 9706097 ~ 9710729 (+) True G98000
TU122222 other downstream 51037 9757073 ~ 9758430 (+) False G98025
TU122266 other downstream 109682 9815718 ~ 9872005 (+) True G98053
TU122294 other downstream 223556 9929592 ~ 9930804 (+) False AMCG00015464
TU122332 other downstream 379392 10085428 ~ 10086512 (+) False G98093

Expression Profile