RNA id: TU122394


Basic Information

Item Value
RNA id TU122394
length 348
lncRNA type read_through
GC content 0.53
exon number 3
gene id G98126
representative False

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9929562 ~ 10017869 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ttttttgttttATCCCGTGCACTTTTTAAATAGGCTTTATTGTAACAGGCTCATCAGGAGCAAAAGAAAACATCGCAAGCGAAGAAAAATTCACCCCCCCCTCCAGAGGAAGCGAAGCGTGTGCGTCCGATTTTGTGGTCCTGCAGGAGAGGCGTCCGGAGACTGGAGAGGAGTAAACATCGGTCTGGAGGAGAGGTAGATGGAGGAAGAGGGCTGGTCCTCAGTCCTGGTCCGGTACAGTCCAGTCCACCTCAGTCACGCCTCTTGTAATTCTCCAGGTTGGCCAGAACCCAGCCAGACGGGCCCAGGATCGCAATAGACATGAGTCCCAATCCGATGGCAGTTTCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU122391 lncRNA downstream 51201 9878459 ~ 9879140 (-) False AMCG00015471
TU122260 lncRNA downstream 114875 9813401 ~ 9815466 (-) True AMCG00015460
TU122205 lncRNA downstream 224310 9705727 ~ 9706031 (-) True G98012
TU122199 lncRNA downstream 248659 9681165 ~ 9681682 (-) True G98006
TU122081 lncRNA downstream 546217 9383508 ~ 9384124 (-) True G97906
TU122440 lncRNA upstream 895 10018764 ~ 10021555 (-) False AMCG00015479
TU122439 lncRNA upstream 3482 10021351 ~ 10025076 (-) False AMCG00015479
TU122438 lncRNA upstream 8245 10026114 ~ 10075893 (-) True G98163
TU122493 lncRNA upstream 89364 10107233 ~ 10165397 (-) True G98211
TU122498 lncRNA upstream 155232 10173101 ~ 10222525 (-) True G98216
AMCG00015470 mRNA downstream 20907 9899672 ~ 9909434 (-) True AMCG00015470
AMCG00015471 mRNA downstream 33829 9879060 ~ 9896512 (-) True AMCG00015471
AMCG00015469 mRNA downstream 53827 9871748 ~ 9876514 (-) True AMCG00015469
AMCG00015460 mRNA downstream 115406 9808818 ~ 9814935 (-) False AMCG00015460
AMCG00015454 mRNA downstream 160671 9756195 ~ 9769670 (-) True AMCG00015454
AMCG00015479 mRNA upstream 3496 10021365 ~ 10026019 (-) True AMCG00015479
AMCG00015486 mRNA upstream 65919 10083788 ~ 10100629 (-) True AMCG00015486
AMCG00015485 mRNA upstream 92526 10110395 ~ 10111184 (-) True AMCG00015485
AMCG00015487 mRNA upstream 104130 10121999 ~ 10128211 (-) True AMCG00015487
AMCG00015497 mRNA upstream 170973 10188842 ~ 10193858 (-) True AMCG00015497
TU122362 other downstream 90831 9837502 ~ 9839510 (-) True G98094
TU122072 other downstream 574609 9353217 ~ 9355732 (-) True G97897
TU122046 other downstream 751674 9176218 ~ 9178667 (-) False AMCG00015419
TU122010 other downstream 890200 9038614 ~ 9040141 (-) True AMCG00015409
TU121992 other downstream 970197 8956415 ~ 8960144 (-) False AMCG00015400
TU122506 other upstream 172552 10190421 ~ 10192287 (-) False AMCG00015497
TU122509 other upstream 178749 10196618 ~ 10198654 (-) False AMCG00015493
TU122510 other upstream 178749 10196618 ~ 10198654 (-) False AMCG00015493
TU122511 other upstream 178749 10196618 ~ 10198654 (-) False AMCG00015493
TU122512 other upstream 178749 10196618 ~ 10198654 (-) False AMCG00015493

Expression Profile