RNA id: TU122811


Basic Information

Item Value
RNA id TU122811
length 210
lncRNA type inter_gene
GC content 0.28
exon number 2
gene id G98442
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10988856 ~ 11019109 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TAGcaattcattgtatttattactatatAAATTCACAGCACAAAAGTACAATACATTAGCTTTATACACTGAAGACAAGTGCTTACTTCTTTGGGATATTCCTGTGAGATTTGGATTTTTGGAGATCAGGTAATATATGTGGTTCTTTTTTATGCACATTTCTATCACAACTTAAATCATTAAGTAAATATGCATAAGATatttcaatta

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU122795 lncRNA upstream 50290 10924132 ~ 10938566 (+) True G98430
TU122777 lncRNA upstream 168686 10819748 ~ 10820170 (+) True G98422
TU122739 lncRNA upstream 280103 10708421 ~ 10708753 (+) True G98398
TU122658 lncRNA upstream 416966 10529960 ~ 10571890 (+) True G98338
TU122657 lncRNA upstream 448043 10529960 ~ 10540813 (+) False G98338
TU122926 lncRNA downstream 342924 11362033 ~ 11365854 (+) True AMCG00015544
TU122927 lncRNA downstream 342924 11362033 ~ 11416599 (+) False AMCG00015544
TU122970 lncRNA downstream 447743 11466852 ~ 11468628 (+) True G98569
TU122993 lncRNA downstream 528456 11547565 ~ 11547819 (+) True G98590
TU123031 lncRNA downstream 1380624 12399733 ~ 12405119 (+) True G98625
AMCG00015529 mRNA upstream 66326 10911450 ~ 10922530 (+) True AMCG00015529
AMCG00015528 mRNA upstream 92691 10872670 ~ 10896165 (+) True AMCG00015528
AMCG00015520 mRNA upstream 216292 10769384 ~ 10772564 (+) True AMCG00015520
AMCG00015521 mRNA upstream 246451 10739470 ~ 10742405 (+) True AMCG00015521
AMCG00015522 mRNA upstream 251881 10735359 ~ 10736975 (+) True AMCG00015522
AMCG00015539 mRNA downstream 40381 11059490 ~ 11066584 (+) True AMCG00015539
AMCG00015537 mRNA downstream 148178 11167287 ~ 11175559 (+) True AMCG00015537
AMCG00015538 mRNA downstream 318237 11337346 ~ 11342116 (+) True AMCG00015538
AMCG00015546 mRNA downstream 332862 11351971 ~ 11354018 (+) True AMCG00015546
AMCG00015547 mRNA downstream 334962 11354071 ~ 11356899 (+) True AMCG00015547
TU122743 other upstream 247723 10735979 ~ 10741133 (+) True G98402
TU122613 other upstream 538193 10448166 ~ 10450663 (+) True G98302
TU122544 other upstream 671531 10316908 ~ 10317325 (+) True G98251
TU122488 other upstream 771655 10213001 ~ 10217201 (+) False AMCG00015492
TU122336 other upstream 902344 10085428 ~ 10086512 (+) True G98093
TU122817 other downstream 45609 11064718 ~ 11066855 (+) False AMCG00015539
TU122931 other downstream 339043 11358152 ~ 11361743 (+) False AMCG00015544
TU123045 other downstream 1441475 12460584 ~ 12462665 (+) False AMCG00015555
TU123193 other downstream 1956530 12975639 ~ 13046813 (+) True G98759
TU123357 other downstream 2404771 13423880 ~ 13429300 (+) True G98878

Expression Profile