RNA id: TU123577


Basic Information

Item Value
RNA id TU123577
length 225
lncRNA type read_through
GC content 0.43
exon number 3
gene id G99002
representative False

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 13579725 ~ 13816527 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ggttaatacagtacagtacagacacactgactgactggacactacagtacattaacactgcactgagagagagaggattaatacagtacagacacactgactggacactacagtacattaacactgcactgagagagagagggttaatacagtacagacacactgactggacactacagtacattaacactgcactgagagagagagggttaatacagtacagca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123527 lncRNA downstream 38768 13538527 ~ 13540957 (-) True G98993
TU123526 lncRNA downstream 39727 13539618 ~ 13539998 (-) True G98992
TU123501 lncRNA downstream 60205 13464858 ~ 13519520 (-) True G98973
TU123470 lncRNA downstream 163225 13396647 ~ 13416500 (-) True G98950
TU123476 lncRNA downstream 243796 13329892 ~ 13335929 (-) True G98953
TU123614 lncRNA upstream 17990 13834517 ~ 13840231 (-) False AMCG00015612
TU123615 lncRNA upstream 17990 13834517 ~ 13840231 (-) False AMCG00015612
TU123616 lncRNA upstream 17990 13834517 ~ 13839676 (-) False AMCG00015612
TU123633 lncRNA upstream 66596 13883123 ~ 13884670 (-) True G99049
TU123635 lncRNA upstream 84829 13901356 ~ 13902314 (-) True G99051
AMCG00015599 mRNA downstream 58711 13520664 ~ 13521014 (-) True AMCG00015599
AMCG00015598 mRNA downstream 110903 13458554 ~ 13468822 (-) True AMCG00015598
AMCG00015592 mRNA downstream 125949 13442591 ~ 13453776 (-) True AMCG00015592
AMCG00015595 mRNA downstream 147369 13426856 ~ 13432356 (-) True AMCG00015595
AMCG00015593 mRNA downstream 154849 13424469 ~ 13424876 (-) True AMCG00015593
AMCG00015613 mRNA upstream 10450 13826977 ~ 13829722 (-) True AMCG00015613
AMCG00015612 mRNA upstream 21424 13837951 ~ 13850783 (-) False AMCG00015612
AMCG00015611 mRNA upstream 49324 13865851 ~ 13869990 (-) True AMCG00015611
AMCG00015614 mRNA upstream 240812 14057339 ~ 14076142 (-) True AMCG00015614
AMCG00015615 mRNA upstream 262967 14079494 ~ 14084022 (-) True AMCG00015615
TU123499 other downstream 119936 13458127 ~ 13459789 (-) False AMCG00015598
TU122943 other downstream 2163063 11414367 ~ 11416662 (-) True G98546
TU122938 other downstream 2193526 11353783 ~ 11386199 (-) False G98543
TU122907 other downstream 2318557 11233315 ~ 11261168 (-) False AMCG00015535
TU123617 other upstream 24702 13841229 ~ 13864738 (-) False AMCG00015612
TU123618 other upstream 24702 13841229 ~ 13864738 (-) True AMCG00015612
TU123619 other upstream 24702 13841229 ~ 13864738 (-) False AMCG00015612
TU123831 other upstream 509640 14326167 ~ 14334932 (-) False AMCG00015628
TU123851 other upstream 631184 14447711 ~ 14456695 (-) True G99213

Expression Profile