RNA id: TU123637



Basic Information


Item Value
RNA id TU123637
length 434
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G99053
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 13917595 ~ 13918028 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


acaaacaaacaaacaaacaaacaaacaaacagaattgaAAACTTAGACTGGCTGAGGACCTCGAGTGTCGTTTGGATTGATCTGGAAGACTAAGACCCTGGTGATGACCCCTGGAACACTTTTGACCACGAGACTGCCTAACCCCTCaagacttttgtttgttttgtctggttTTGTTAACCCTGGGAAACAGCTTAGCTGTCCTTGGCTAGCTGGGGATTTTGTTTTGGGTAGCAGACCATCCCTGCTACAGATAGCGCTCCTTACAAAGAGCtaggcttttgttttctctttttggtTTCCCAATATCCAaggtggaatgaaaataaaccaacagcCTGGGGCTGTATTTACCCTCTTCCGTGGTTTGTGTTGATGTATTTTGACATTGTTCCTGCCTAACATTCATTGGCTGCTGTAGCCCCACCCCGCAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU123465 lncRNA upstream 32924 13881425 ~ 13884671 (+) True AMCG00015608
TU123466 lncRNA upstream 32924 13881425 ~ 13884671 (+) False AMCG00015608
TU123431 lncRNA upstream 106656 13791042 ~ 13810939 (+) True G98918
TU123406 lncRNA upstream 319880 13579724 ~ 13597715 (+) True G98901
TU123377 lncRNA upstream 401166 13493782 ~ 13516429 (+) True G98889
TU123640 lncRNA downstream 7220 13925248 ~ 13933503 (+) True G99056
TU123653 lncRNA downstream 133467 14051495 ~ 14065138 (+) True G99068
TU123655 lncRNA downstream 145901 14063929 ~ 14109320 (+) True G99070
TU123660 lncRNA downstream 178917 14096945 ~ 14097938 (+) False G99074
TU123661 lncRNA downstream 178917 14096945 ~ 14099137 (+) False G99074
AMCG00015608 mRNA upstream 32929 13882610 ~ 13884666 (+) False AMCG00015608
AMCG00015610 mRNA upstream 82849 13832595 ~ 13834746 (+) True AMCG00015610
AMCG00015609 mRNA upstream 95623 13802481 ~ 13821972 (+) True AMCG00015609
AMCG00015607 mRNA upstream 200773 13689090 ~ 13716822 (+) True AMCG00015607
AMCG00015600 mRNA upstream 310340 13598286 ~ 13607255 (+) True AMCG00015600
AMCG00015616 mRNA downstream 67515 13985543 ~ 13993089 (+) True AMCG00015616
AMCG00015617 mRNA downstream 171939 14089967 ~ 14096267 (+) True AMCG00015617
AMCG00015618 mRNA downstream 186300 14104328 ~ 14112925 (+) True AMCG00015618
AMCG00015619 mRNA downstream 223094 14141122 ~ 14146970 (+) True AMCG00015619
AMCG00015625 mRNA downstream 303568 14221596 ~ 14234664 (+) True AMCG00015625
TU123399 other upstream 304303 13583970 ~ 13613292 (+) False AMCG00015602
TU123395 other upstream 324225 13576196 ~ 13593370 (+) True AMCG00015602
TU123364 other upstream 470316 13445525 ~ 13447279 (+) True G98884
TU123358 other upstream 480448 13433051 ~ 13437147 (+) True AMCG00015591
TU123659 other downstream 178917 14096945 ~ 14100855 (+) True G99074
TU124082 other downstream 1130895 15048923 ~ 15179850 (+) False AMCG00015657
TU124222 other downstream 1396008 15314036 ~ 15314414 (+) True G99475
TU124310 other downstream 1878922 15796950 ~ 15801634 (+) True G99541
TU124453 other downstream 2213016 16131044 ~ 16131387 (+) True G99624

Expression Profile