RNA id: TU123732



Basic Information


Item Value
RNA id TU123732
length 346
lncRNA type inter_gene
GC content 0.39
exon number 3
gene id G99125
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 14316400 ~ 14324233 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CATGTGAATGACCTTTTGTCAAtggttatacatttaaattatatattacaatgtatttatctctctcagtgcagtgttaatgtactgtagtgtccatcagtgtgtctgtactttactgtattaaccttttatcacaaacacacacacccacacacacacacacaaacaaacacaaacacacaaacacacacatacacaaacacacactcacacacacacgcacagacacagacacattcttctctttctctctcccaggAAAGGAACCTGataaaatggagaaaaacaaagcaacaggCCAACAGCAAGGTTGTCTTGGCATTATCCCTTCACGCTTCCTATCTGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU123692 lncRNA upstream 163775 14126621 ~ 14152625 (+) True G99093
TU123691 lncRNA upstream 179725 14126621 ~ 14136675 (+) False G99093
TU123655 lncRNA upstream 207080 14063929 ~ 14109320 (+) True G99070
TU123743 lncRNA downstream 61900 14386133 ~ 14387285 (+) True G99136
TU123750 lncRNA downstream 64187 14388420 ~ 14390665 (+) True G99138
TU123762 lncRNA downstream 85529 14409762 ~ 14448040 (+) True G99149
TU123748 lncRNA downstream 117258 14441491 ~ 14444142 (+) True G99137
TU123873 lncRNA downstream 168781 14493014 ~ 14495627 (+) True G99229
AMCG00015625 mRNA upstream 81736 14221596 ~ 14234664 (+) True AMCG00015625
AMCG00015619 mRNA upstream 169430 14141122 ~ 14146970 (+) True AMCG00015619
AMCG00015618 mRNA upstream 203475 14104328 ~ 14112925 (+) True AMCG00015618
AMCG00015617 mRNA upstream 220133 14089967 ~ 14096267 (+) True AMCG00015617
AMCG00015616 mRNA upstream 323311 13985543 ~ 13993089 (+) True AMCG00015616
AMCG00015629 mRNA downstream 129284 14453517 ~ 14456893 (+) True AMCG00015629
AMCG00015630 mRNA downstream 138427 14462660 ~ 14467684 (+) True AMCG00015630
AMCG00015636 mRNA downstream 177521 14501754 ~ 14502659 (+) True AMCG00015636
AMCG00015639 mRNA downstream 198164 14522397 ~ 14538432 (+) True AMCG00015639
AMCG00015637 mRNA downstream 233516 14557749 ~ 14573035 (+) True AMCG00015637
TU123659 other upstream 215545 14096945 ~ 14100855 (+) True G99074
TU123399 other upstream 703108 13583970 ~ 13613292 (+) False AMCG00015602
TU123395 other upstream 723030 13576196 ~ 13593370 (+) True AMCG00015602
TU123364 other upstream 869121 13445525 ~ 13447279 (+) True G98884
TU123359 other upstream 880698 13433051 ~ 13435702 (+) False AMCG00015591
TU124082 other downstream 724690 15048923 ~ 15179850 (+) False AMCG00015657
TU124222 other downstream 989803 15314036 ~ 15314414 (+) True G99475
TU124310 other downstream 1472717 15796950 ~ 15801634 (+) True G99541
TU124453 other downstream 1806811 16131044 ~ 16131387 (+) True G99624
TU124723 other downstream 2774226 17098459 ~ 17131749 (+) False AMCG00015703

Expression Profile