RNA id: TU124476


Basic Information

Item Value
RNA id TU124476
length 201
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G99644
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 16209443 ~ 16209643 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tccccacgtagtctcctctgttccagggtgaaaaggttcagttcctcagtctctcagtaggacattcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagcccagaactgtacacagtatccagatgagctctaactagcacattgtacagtctga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU124361 lncRNA upstream 249720 15902451 ~ 15959723 (+) True G99566
TU124108 lncRNA upstream 937786 15248249 ~ 15271657 (+) True G99384
TU124096 lncRNA upstream 956729 15191669 ~ 15252714 (+) True G99375
TU124097 lncRNA upstream 958541 15191669 ~ 15250902 (+) False G99375
TU124057 lncRNA upstream 1027468 15180850 ~ 15181975 (+) False AMCG00015657
TU124494 lncRNA downstream 86182 16295825 ~ 16296030 (+) True G99662
TU124530 lncRNA downstream 230669 16440312 ~ 16457842 (+) True AMCG00015682
TU124536 lncRNA downstream 249217 16458860 ~ 16504418 (+) True G99697
TU124537 lncRNA downstream 249217 16458860 ~ 16504418 (+) False G99697
TU124539 lncRNA downstream 249217 16458860 ~ 16504418 (+) False G99697
AMCG00015674 mRNA upstream 96905 16110567 ~ 16112538 (+) True AMCG00015674
AMCG00015675 mRNA upstream 142926 16060344 ~ 16066517 (+) True AMCG00015675
AMCG00015669 mRNA upstream 151648 16054341 ~ 16057795 (+) True AMCG00015669
AMCG00015670 mRNA upstream 161809 16009036 ~ 16047634 (+) True AMCG00015670
AMCG00015671 mRNA upstream 223193 15962359 ~ 15986250 (+) True AMCG00015671
AMCG00015679 mRNA downstream 210753 16420396 ~ 16433377 (+) True AMCG00015679
AMCG00015682 mRNA downstream 223800 16433443 ~ 16440435 (+) False AMCG00015682
AMCG00015678 mRNA downstream 244341 16453984 ~ 16461379 (+) True AMCG00015678
AMCG00015684 mRNA downstream 271705 16481348 ~ 16483888 (+) True AMCG00015684
AMCG00015687 mRNA downstream 285049 16494692 ~ 16498524 (+) False AMCG00015687
TU124453 other upstream 78056 16131044 ~ 16131387 (+) True G99624
TU124310 other upstream 407809 15796950 ~ 15801634 (+) True G99541
TU124222 other upstream 895029 15314036 ~ 15314414 (+) True G99475
TU124082 other upstream 1029593 15048923 ~ 15179850 (+) False AMCG00015657
TU123659 other upstream 2108588 14096945 ~ 14100855 (+) True G99074
TU124723 other downstream 888816 17098459 ~ 17131749 (+) False AMCG00015703
TU124919 other downstream 2110413 18320056 ~ 18325904 (+) True G100007
TU125009 other downstream 2535244 18744887 ~ 18771966 (+) True AMCG00015725
TU125356 other downstream 4057764 20267407 ~ 20268285 (+) True G100338
TU125724 other downstream 6470567 22680210 ~ 22680773 (+) False AMCG00015796

Expression Profile