RNA id: TU124537



Basic Information


Item Value
RNA id TU124537
length 543
lncRNA type read_through
GC content 0.50
exon number 3
gene id G99697
representative False

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 16458860 ~ 16504418 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gaaagggggtcaaacacagtattcgtatggtgttcctaataatcctttaggtgagtgtatactgtacTAACAACCCCTCTCTCTTCATCTCAGGTCTGGAGGATCTCTTCGACACCCCTAACCTGTGTggtctctcctcctccctccccctctctctctccgactCCAAGCACCGTACTCTGGTCTCACTCTCCGAGGATGGGGTAGTGGGGGAAGGAGCGTCAAACTCTTCCTATACATCCCTCCCTCACTTCTCCGCCCTCCATCCCTTCATCCTGGTGCTGTGGAGTGAGGGAGCGGGTGTGCCGCTGTTCATCGGACGAGTGGCCGATCCCAGCATGGGGctatgggagagagagagagagagagaGGGAGatgagagaggggcagagattGCCCTCTCAGTTTAAAGGACAGCAAACATAATGTAgtacaatgtaaaacaatgtatcGCAATGGACACTATCACACAATTAAGCTGCAATTATCACAAAACTACACAAACAGTTCCTGTAAAAGTCAATAAAAAGCTTGGGATTGTCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU124530 lncRNA upstream 1018 16440312 ~ 16457842 (+) True AMCG00015682
TU124494 lncRNA upstream 162830 16295825 ~ 16296030 (+) True G99662
TU124476 lncRNA upstream 249217 16209443 ~ 16209643 (+) True G99644
TU124361 lncRNA upstream 499137 15902451 ~ 15959723 (+) True G99566
TU124108 lncRNA upstream 1187203 15248249 ~ 15271657 (+) True G99384
TU124611 lncRNA downstream 31667 16536085 ~ 16536332 (+) True G99742
TU124614 lncRNA downstream 33819 16538237 ~ 16539381 (+) True G99745
TU124642 lncRNA downstream 94061 16598479 ~ 16599419 (+) True G99771
TU124643 lncRNA downstream 95783 16600201 ~ 16602947 (+) True G99772
TU124645 lncRNA downstream 101338 16605756 ~ 16605979 (+) True G99774
AMCG00015682 mRNA upstream 18425 16433443 ~ 16440435 (+) False AMCG00015682
AMCG00015679 mRNA upstream 25483 16420396 ~ 16433377 (+) True AMCG00015679
AMCG00015674 mRNA upstream 346322 16110567 ~ 16112538 (+) True AMCG00015674
AMCG00015675 mRNA upstream 392343 16060344 ~ 16066517 (+) True AMCG00015675
AMCG00015669 mRNA upstream 401065 16054341 ~ 16057795 (+) True AMCG00015669
AMCG00015689 mRNA downstream 5279 16509697 ~ 16512290 (+) True AMCG00015689
AMCG00015688 mRNA downstream 12478 16516896 ~ 16522881 (+) True AMCG00015688
AMCG00015692 mRNA downstream 64030 16568448 ~ 16569251 (+) True AMCG00015692
AMCG00015686 mRNA downstream 67233 16571651 ~ 16575186 (+) True AMCG00015686
AMCG00015699 mRNA downstream 175328 16679746 ~ 16710802 (+) True AMCG00015699
TU124453 other upstream 327473 16131044 ~ 16131387 (+) True G99624
TU124310 other upstream 657226 15796950 ~ 15801634 (+) True G99541
TU124222 other upstream 1144446 15314036 ~ 15314414 (+) True G99475
TU124082 other upstream 1279010 15048923 ~ 15179850 (+) False AMCG00015657
TU123659 other upstream 2358005 14096945 ~ 14100855 (+) True G99074
TU124723 other downstream 594041 17098459 ~ 17131749 (+) False AMCG00015703
TU124919 other downstream 1815638 18320056 ~ 18325904 (+) True G100007
TU125009 other downstream 2240469 18744887 ~ 18771966 (+) True AMCG00015725
TU125356 other downstream 3762989 20267407 ~ 20268285 (+) True G100338
TU125724 other downstream 6175792 22680210 ~ 22680773 (+) False AMCG00015796

Expression Profile