RNA id: TU125231



Basic Information


Item Value
RNA id TU125231
length 331
lncRNA type inter_gene
GC content 0.36
exon number 2
gene id G100241
representative False

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 19726572 ~ 19782763 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tgcttttttattgtctAATTGCTACATCCCTtatctaaaaaagaaaattgttctacttgtttttctttgcccTGTTAAAATAACACAGGtctgtattttccattttctactATTTCGCTTTATCTATTTCCAGAAATGTCAAGTGAGAAAAGTTTATGTCTCCTGTTACTTCCACCTTTTCCTGGAGCGCTCTCCTAACAGTGAGGCTTGGATTTCACTCTTCATACTGagTTGTCTGAGTGCTGACATGCCTATTACTGAAGCAAACCAGAATTTAATAGAAATGCAGATCTTCCTGAACAAAAGCCTGAGCTATTTTAACGTAagttac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU125219 lncRNA upstream 15412 19712887 ~ 19713244 (+) True G100232
TU125103 lncRNA upstream 560822 19133064 ~ 19167834 (+) True G100145
TU125101 lncRNA upstream 603152 19120828 ~ 19125504 (+) True G100143
TU125015 lncRNA upstream 884207 18758062 ~ 18844449 (+) True G100082
TU124967 lncRNA upstream 1098512 18628322 ~ 18630144 (+) False G100046
TU125368 lncRNA downstream 595082 20324610 ~ 20327167 (+) True G100349
TU125492 lncRNA downstream 1049818 20779346 ~ 20780467 (+) True G100461
TU125516 lncRNA downstream 1098800 20828328 ~ 20828614 (+) True G100483
TU125537 lncRNA downstream 1334522 21064050 ~ 21065385 (+) True G100502
TU125542 lncRNA downstream 1577078 21306606 ~ 21310605 (+) True G100507
AMCG00015744 mRNA upstream 23562 19704423 ~ 19705094 (+) True AMCG00015744
AMCG00015742 mRNA upstream 56760 19640046 ~ 19671896 (+) True AMCG00015742
AMCG00015741 mRNA upstream 215731 19448906 ~ 19512925 (+) True AMCG00015741
AMCG00015737 mRNA upstream 619668 19100220 ~ 19108988 (+) True AMCG00015737
AMCG00015736 mRNA upstream 664802 19058062 ~ 19063854 (+) True AMCG00015736
AMCG00015746 mRNA downstream 33273 19762801 ~ 19791302 (+) True AMCG00015746
AMCG00015745 mRNA downstream 84062 19813590 ~ 19821835 (+) True AMCG00015745
AMCG00015748 mRNA downstream 138341 19867869 ~ 19905638 (+) True AMCG00015748
AMCG00015747 mRNA downstream 231016 19960544 ~ 19968342 (+) True AMCG00015747
AMCG00015756 mRNA downstream 305820 20035348 ~ 20038407 (+) True AMCG00015756
TU125009 other upstream 956690 18744887 ~ 18771966 (+) True AMCG00015725
TU124919 other upstream 1402752 18320056 ~ 18325904 (+) True G100007
TU124723 other upstream 2596907 17098459 ~ 17131749 (+) False AMCG00015703
TU124453 other upstream 3597269 16131044 ~ 16131387 (+) True G99624
TU124310 other upstream 3927022 15796950 ~ 15801634 (+) True G99541
TU125356 other downstream 537879 20267407 ~ 20268285 (+) True G100338
TU125724 other downstream 2950682 22680210 ~ 22680773 (+) False AMCG00015796
TU126202 other downstream 5135561 24865089 ~ 24865552 (+) True G101061
TU126442 other downstream 6534387 26263915 ~ 26264308 (+) True G101248
TU126474 other downstream 6643625 26373153 ~ 26377699 (+) True G101275

Expression Profile