RNA id: TU126264



Basic Information


Item Value
RNA id TU126264
length 310
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G101107
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 25420890 ~ 25495919 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


attggtttcttgaacatgacaatgagttcactgtactaaactggcccccacagatagatagagcatctttgggatgtggtggaacaggagcttcgtgccctggatgtgcatcccacaaatctccatcaactgcaagatgctatcctatcaatatgggccaacatttctaaagaatgctttcagcaccttgttgaatcaatgtcacgtagaattaaggcagttctgaaggcgaaagggggtcaaacacagtattagtatggtgttcctaataatcctttaggtgagtgtatattggacatttttgttacct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU126239 lncRNA upstream 11241 25408665 ~ 25409649 (+) True G101088
TU126237 lncRNA upstream 12354 25388061 ~ 25408536 (+) True G101087
TU126213 lncRNA upstream 309832 25110798 ~ 25111058 (+) True G101069
TU126169 lncRNA upstream 812336 24603302 ~ 24608554 (+) True G101029
TU126137 lncRNA upstream 823073 24596474 ~ 24597817 (+) True G100998
TU126273 lncRNA downstream 171909 25667828 ~ 25725578 (+) True G101116
TU126469 lncRNA downstream 868376 26364295 ~ 26365059 (+) True G101270
TU126470 lncRNA downstream 871678 26367597 ~ 26367905 (+) True G101271
TU126471 lncRNA downstream 873566 26369485 ~ 26369703 (+) True G101272
TU126472 lncRNA downstream 874173 26370092 ~ 26370326 (+) True G101273
AMCG00015845 mRNA upstream 15301 25373915 ~ 25405589 (+) True AMCG00015845
AMCG00015846 mRNA upstream 83614 25334016 ~ 25337276 (+) True AMCG00015846
AMCG00015842 mRNA upstream 826849 24559125 ~ 24594041 (+) True AMCG00015842
AMCG00015836 mRNA upstream 968001 24442637 ~ 24452889 (+) True AMCG00015836
AMCG00015837 mRNA upstream 981057 24415124 ~ 24439833 (+) True AMCG00015837
AMCG00015847 mRNA downstream 457440 25953359 ~ 25997861 (+) True AMCG00015847
AMCG00015849 mRNA downstream 522772 26018691 ~ 26030507 (+) True AMCG00015849
AMCG00015850 mRNA downstream 542429 26038348 ~ 26040669 (+) True AMCG00015850
AMCG00015848 mRNA downstream 550187 26046106 ~ 26055409 (+) True AMCG00015848
AMCG00015853 mRNA downstream 560183 26056102 ~ 26061085 (+) True AMCG00015853
TU126202 other upstream 555338 24865089 ~ 24865552 (+) True G101061
TU125724 other upstream 2740117 22680210 ~ 22680773 (+) False AMCG00015796
TU125356 other upstream 5152605 20267407 ~ 20268285 (+) True G100338
TU125009 other upstream 6648924 18744887 ~ 18771966 (+) True AMCG00015725
TU124919 other upstream 7094986 18320056 ~ 18325904 (+) True G100007
TU126442 other downstream 767996 26263915 ~ 26264308 (+) True G101248
TU126474 other downstream 877234 26373153 ~ 26377699 (+) True G101275
TU126639 other downstream 2394633 27890552 ~ 27992014 (+) False G101400
TU126748 other downstream 3081581 28577500 ~ 28580829 (+) True AMCG00015901
TU126954 other downstream 4137519 29633438 ~ 29638781 (+) False AMCG00015918

Expression Profile