RNA id: TU126471



Basic Information


Item Value
RNA id TU126471
length 219
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G101272
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 26369485 ~ 26369703 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


taattaaggaaataaccCATCACTTATCTCCCATTGAAAATCAGCCCACAGTCAGTTGGCagtcaaagtttttttttttttttttttcttcttgaaacCAAGGTATTgcaatgtctgttttattcaatTTAGGGTACATATTAAATATCTACAGATTATTTCAAAGAGATAAACCTATTGTAAGATAAGTTAATAGATATAAAGGACTGCAGGAAGGAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU126470 lncRNA upstream 1580 26367597 ~ 26367905 (+) True G101271
TU126469 lncRNA upstream 4426 26364295 ~ 26365059 (+) True G101270
TU126273 lncRNA upstream 643907 25667828 ~ 25725578 (+) True G101116
TU126264 lncRNA upstream 873566 25420890 ~ 25495919 (+) True G101107
TU126239 lncRNA upstream 959836 25408665 ~ 25409649 (+) True G101088
TU126472 lncRNA downstream 389 26370092 ~ 26370326 (+) True G101273
TU126481 lncRNA downstream 105357 26475060 ~ 26475349 (+) True G101282
TU126517 lncRNA downstream 199401 26569104 ~ 26572523 (+) True G101306
TU126541 lncRNA downstream 210010 26579713 ~ 26579971 (+) True G101320
TU126564 lncRNA downstream 337173 26706876 ~ 26707101 (+) True G101340
AMCG00015867 mRNA upstream 13391 26333482 ~ 26356094 (+) True AMCG00015867
AMCG00015872 mRNA upstream 60753 26306627 ~ 26308732 (+) True AMCG00015872
AMCG00015870 mRNA upstream 63691 26270391 ~ 26305794 (+) True AMCG00015870
AMCG00015868 mRNA upstream 107996 26254913 ~ 26261489 (+) True AMCG00015868
AMCG00015869 mRNA upstream 116239 26242131 ~ 26253246 (+) True AMCG00015869
AMCG00015875 mRNA downstream 151487 26521190 ~ 26525630 (+) True AMCG00015875
AMCG00015876 mRNA downstream 157407 26527110 ~ 26562104 (+) True AMCG00015876
AMCG00015877 mRNA downstream 193018 26562721 ~ 26567558 (+) True AMCG00015877
AMCG00015882 mRNA downstream 303041 26672744 ~ 26699429 (+) True AMCG00015882
AMCG00015886 mRNA downstream 1448133 27817836 ~ 27840281 (+) True AMCG00015886
TU126442 other upstream 105177 26263915 ~ 26264308 (+) True G101248
TU126202 other upstream 1503933 24865089 ~ 24865552 (+) True G101061
TU125724 other upstream 3688712 22680210 ~ 22680773 (+) False AMCG00015796
TU125356 other upstream 6101200 20267407 ~ 20268285 (+) True G100338
TU125009 other upstream 7597519 18744887 ~ 18771966 (+) True AMCG00015725
TU126474 other downstream 3450 26373153 ~ 26377699 (+) True G101275
TU126639 other downstream 1520849 27890552 ~ 27992014 (+) False G101400
TU126748 other downstream 2207797 28577500 ~ 28580829 (+) True AMCG00015901
TU126954 other downstream 3263735 29633438 ~ 29638781 (+) False AMCG00015918
TU127075 other downstream 3796325 30166028 ~ 30168289 (+) True G101752

Expression Profile