RNA id: TU126838


Basic Information

Item Value
RNA id TU126838
length 223
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G101560
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 29186105 ~ 29186327 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ggggctgtggacagcttgagagacacaagatggactgaactttagaaaatcctgaatatgagcaaaatgaaaagaaatgtaatacagaaaatgtaaattaaaactttcagtaatcagcataatctcagtaaatactacaccaacccaagaccaatattttcttgcatttcagaatatatatcaaacgtattatttaaataacagatacaatgtaaagattgaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU126836 lncRNA upstream 3236 29182531 ~ 29182869 (+) True G101558
TU126834 lncRNA upstream 8781 29174777 ~ 29177324 (+) True G101556
TU126833 lncRNA upstream 18892 29166935 ~ 29167213 (+) True G101555
TU126763 lncRNA upstream 595046 28589573 ~ 28591059 (+) True G101504
TU126744 lncRNA upstream 739888 28445916 ~ 28446217 (+) True G101486
TU126931 lncRNA downstream 392202 29578529 ~ 29595891 (+) True G101638
TU126990 lncRNA downstream 519650 29705977 ~ 29728715 (+) True G101678
TU127198 lncRNA downstream 1408751 30595078 ~ 30597798 (+) True G101848
TU127199 lncRNA downstream 1408751 30595078 ~ 30641350 (+) False G101848
TU127300 lncRNA downstream 2081078 31267405 ~ 31287766 (+) False G101930
AMCG00015908 mRNA upstream 78526 29079429 ~ 29107579 (+) True AMCG00015908
AMCG00015902 mRNA upstream 597825 28586425 ~ 28588280 (+) True AMCG00015902
AMCG00015901 mRNA upstream 605461 28577870 ~ 28580644 (+) False AMCG00015901
AMCG00015900 mRNA upstream 642576 28541050 ~ 28543529 (+) True AMCG00015900
AMCG00015895 mRNA upstream 744793 28432038 ~ 28441312 (+) True AMCG00015895
AMCG00015912 mRNA downstream 4779 29191106 ~ 29195801 (+) True AMCG00015912
AMCG00015911 mRNA downstream 66559 29252886 ~ 29259988 (+) True AMCG00015911
AMCG00015913 mRNA downstream 154157 29340484 ~ 29352375 (+) True AMCG00015913
AMCG00015915 mRNA downstream 214184 29400511 ~ 29409924 (+) True AMCG00015915
AMCG00015914 mRNA downstream 295942 29482269 ~ 29486582 (+) True AMCG00015914
TU126748 other upstream 605276 28577500 ~ 28580829 (+) True AMCG00015901
TU126639 other upstream 1194091 27890552 ~ 27992014 (+) False G101400
TU126474 other upstream 2808406 26373153 ~ 26377699 (+) True G101275
TU126442 other upstream 2921797 26263915 ~ 26264308 (+) True G101248
TU126202 other upstream 4320553 24865089 ~ 24865552 (+) True G101061
TU126954 other downstream 447111 29633438 ~ 29638781 (+) False AMCG00015918
TU127075 other downstream 979701 30166028 ~ 30168289 (+) True G101752
TU127225 other downstream 1617762 30804089 ~ 30809238 (+) True G101870
TU127298 other downstream 2076134 31262461 ~ 31287766 (+) True G101930
TU127369 other downstream 2554201 31740528 ~ 31746116 (+) False AMCG00015959

Expression Profile