RNA id: TU127669


Basic Information

Item Value
RNA id TU127669
length 309
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G102219
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 32843190 ~ 32843498 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATCTGGTCAGCATTGTTTCCTAAGACAGACCCATATGTGTcacagtgtttgttgttgttgtatttatttgtttatgcatgTACACAGTGCcctaaaacaatacacaaacgGGAGAAGGGCAGTTTGCAAACACACCAGAAAGCAACGTGCAGGAGTTCCTATTCGTCCTCCCGTTTCTCAGCATTGCCCTCGTTCAACACGGAGACGAACGACTGCATCTCATTGCTTCCTGGTTCTCAGCAGCCCATTAGAGACGTCTGCAGACGAGAGAAGAGGCAGGGTTGTGTGTCGAGCACTGTGCGTGCCAGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU127654 lncRNA upstream 44633 32797334 ~ 32798557 (+) True G102204
TU127653 lncRNA upstream 46855 32796058 ~ 32796335 (+) True G102203
TU127651 lncRNA upstream 52057 32782716 ~ 32791133 (+) True G102202
TU127633 lncRNA upstream 119312 32719090 ~ 32723878 (+) False G102193
TU127636 lncRNA upstream 119312 32719090 ~ 32723878 (+) True G102193
TU127670 lncRNA downstream 106 32843604 ~ 32843847 (+) True G102220
TU127727 lncRNA downstream 11772 32855270 ~ 32856077 (+) True G102267
AMCG00015996 mRNA upstream 87370 32752783 ~ 32755820 (+) True AMCG00015996
AMCG00015994 mRNA upstream 96655 32729208 ~ 32746535 (+) True AMCG00015994
AMCG00015995 mRNA upstream 141181 32698057 ~ 32702009 (+) True AMCG00015995
AMCG00015992 mRNA upstream 161055 32679123 ~ 32682135 (+) True AMCG00015992
AMCG00015993 mRNA upstream 252979 32587833 ~ 32590211 (+) True AMCG00015993
TU127648 other upstream 61474 32780113 ~ 32781716 (+) True G102201
TU127514 other upstream 445780 32382249 ~ 32397410 (+) True AMCG00015981
TU127466 other upstream 672115 32164196 ~ 32171075 (+) True G102064
TU127412 other upstream 891320 31948475 ~ 31951870 (+) True AMCG00015966
TU127368 other upstream 1097074 31742234 ~ 31746116 (+) True AMCG00015959
TU127749 other downstream 64001 32907499 ~ 32909553 (+) True G102286

Expression Profile