RNA id: AMCG00016013


Basic Information

Item Value
RNA id AMCG00016013
length 417
RNA type mRNA
GC content 0.48
exon number 3
gene id AMCG00016013
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 149601 ~ 153973 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTGTCACCTGAAGGACTTTGTGCAGATTTTGCCAAAACAGCTTCATCATGAGGTGTCGGAAGGAGGAGACAATCTGAGCGTTGGCCAAAGACAGCTTCTCTGTCTGGCCCGTGCCTTACTACGGAAGACACAAATCCTGGTTCTAGATGAAGCAACAGCTTCCATCGACATCGAAACAGACAATTTGGTTCAGCTCACCATACGAAAGGCGTTTGCTGACTGCACTATTTTAACCATCGCACACAGACTGCAGACCATCATGGACTCAGACAGggTGCTGGTTCTGGATTCGGGCAGAATCATAGAATTTGATTCCCCTTCCAACCTTATCCAGCAGAAGGGCGTTTTCTTCCATATGGCATCAGAGGCAGGGGTAATAAACAGCATCAACTGTGACCCTGTCCCTATCAGCTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU12722 lncRNA upstream 46306 200279 ~ 201116 (-) True G10214
TU12743 lncRNA upstream 116948 270921 ~ 271523 (-) True G10229
TU12748 lncRNA upstream 168656 322629 ~ 323000 (-) True G10233
TU12826 lncRNA upstream 1379428 1533401 ~ 1533655 (-) True G10298
TU12836 lncRNA upstream 1542832 1696805 ~ 1705596 (-) True G10307
AMCG00016011 mRNA downstream 36036 90982 ~ 113565 (-) True AMCG00016011
AMCG00016012 mRNA upstream 5733 159706 ~ 181537 (-) True AMCG00016012
AMCG00016010 mRNA upstream 33106 187079 ~ 196898 (-) True AMCG00016010
AMCG00016018 mRNA upstream 1109562 1263535 ~ 1312085 (-) True AMCG00016018
AMCG00016020 mRNA upstream 1159806 1313779 ~ 1341211 (-) True AMCG00016020
AMCG00016019 mRNA upstream 1305099 1459072 ~ 1459832 (-) True AMCG00016019
TU12954 other upstream 2556426 2710399 ~ 2710685 (-) True G10420
TU13017 other upstream 2880449 3034422 ~ 3035183 (-) True G10478
TU13149 other upstream 3375279 3529252 ~ 3539193 (-) False AMCG00016046
TU13237 other upstream 3753786 3907759 ~ 3920424 (-) False AMCG00016049
TU14024 other upstream 8037573 8191546 ~ 8194432 (-) False G11326

Expression Profile