Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00016151 |
| length | 1167 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 10 |
| gene id | AMCG00016151 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 9333693 ~ 9358730 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0007160 | cell-matrix adhesion | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| GO:0016757 | transferase activity, transferring glycosyl groups | molecular_function |
| id | description |
|---|---|
| K13675 | B3GALTL; UDP-glucose:O-linked fucose beta-1,3-glucosyltransferase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU14314 | lncRNA | downstream | 19246 | 9314000 ~ 9314447 (-) | True | G11571 |
| TU14210 | lncRNA | downstream | 274593 | 9055904 ~ 9059100 (-) | True | G11482 |
| TU14153 | lncRNA | downstream | 505933 | 8826681 ~ 8827760 (-) | False | AMCG00016134 |
| TU14046 | lncRNA | downstream | 1001890 | 8326182 ~ 8331803 (-) | True | G11346 |
| TU14045 | lncRNA | downstream | 1012651 | 8320697 ~ 8321042 (-) | True | G11345 |
| TU14397 | lncRNA | upstream | 77072 | 9435802 ~ 9498753 (-) | False | G11633 |
| TU14398 | lncRNA | upstream | 137461 | 9496191 ~ 9498753 (-) | True | G11633 |
| TU14399 | lncRNA | upstream | 137461 | 9496191 ~ 9498753 (-) | False | G11633 |
| TU14420 | lncRNA | upstream | 184778 | 9543508 ~ 9543743 (-) | True | G11650 |
| TU14430 | lncRNA | upstream | 231005 | 9589735 ~ 9594953 (-) | True | G11658 |
| AMCG00016148 | mRNA | downstream | 44369 | 9267201 ~ 9289324 (-) | True | AMCG00016148 |
| AMCG00016144 | mRNA | downstream | 149783 | 9119568 ~ 9183910 (-) | True | AMCG00016144 |
| AMCG00016142 | mRNA | downstream | 217539 | 9111277 ~ 9116154 (-) | True | AMCG00016142 |
| AMCG00016141 | mRNA | downstream | 222886 | 9089169 ~ 9110807 (-) | True | AMCG00016141 |
| AMCG00016139 | mRNA | downstream | 278114 | 9051060 ~ 9055579 (-) | True | AMCG00016139 |
| AMCG00016152 | mRNA | upstream | 47572 | 9406302 ~ 9410567 (-) | True | AMCG00016152 |
| AMCG00016155 | mRNA | upstream | 57792 | 9416522 ~ 9416725 (-) | True | AMCG00016155 |
| AMCG00016154 | mRNA | upstream | 61399 | 9420129 ~ 9427244 (-) | True | AMCG00016154 |
| AMCG00016149 | mRNA | upstream | 73900 | 9432630 ~ 9441739 (-) | True | AMCG00016149 |
| AMCG00016153 | mRNA | upstream | 94090 | 9452820 ~ 9456545 (-) | True | AMCG00016153 |
| TU14024 | other | downstream | 1139261 | 8191546 ~ 8194432 (-) | False | G11326 |
| TU13237 | other | downstream | 5413269 | 3907759 ~ 3920424 (-) | False | AMCG00016049 |
| TU13149 | other | downstream | 5794500 | 3529252 ~ 3539193 (-) | False | AMCG00016046 |
| TU13017 | other | downstream | 6298510 | 3034422 ~ 3035183 (-) | True | G10478 |
| TU12954 | other | downstream | 6623008 | 2710399 ~ 2710685 (-) | True | G10420 |
| TU14520 | other | upstream | 1488104 | 10846834 ~ 10847811 (-) | True | AMCG00016176 |
| TU14519 | other | upstream | 1488201 | 10846931 ~ 10847811 (-) | False | AMCG00016176 |
| TU14856 | other | upstream | 2964431 | 12323161 ~ 12329033 (-) | True | AMCG00016211 |
| TU15028 | other | upstream | 3503369 | 12862099 ~ 12870560 (-) | False | AMCG00016226 |
| TU15029 | other | upstream | 3503369 | 12862099 ~ 12862870 (-) | False | AMCG00016226 |
