RNA id: AMCG00016164


Basic Information

Item Value
RNA id AMCG00016164
length 632
RNA type mRNA
GC content 0.44
exon number 2
gene id AMCG00016164
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 9712133 ~ 9713118 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GACATTGCTTCATGTCAGAAGGAAACCAAACCACTGTGAAGGAGTTCATTATCATGGGCTTCCCTGGACTTCAGCCTCAATATTACTGGATGGCATCCATGACTTTGTTTCTGGTGTATGTGAGCACTCTGCTGGGCAACCTGCTCACAACCACGTTGCTGCTGATCGAAGAGCATCTCCACAAACCCATGTACTTCATCATCTTAAACCTTGCATTGTTAGCATGTGCTGACATTAAGGTATACAGTTTAGTGGGGTTCACATTAGGTATGTCAGTGTTACTGGTACCTCTCTGTTTTATCATCTATTCTTACATACAGATCATTCTGTCAGTGTTAAGGATTGCAAGCTCCCAAGGACGCCACAAAGCCTTTTCCACTTGCAGTGCACAGTTTTGCATCATAACACTGTACTATGGTCCCCGATGCTTTGTTTACATCGCAAATATTGCAAACTTTCCCATCACCACTGATTTCCGCATCCTTATGATCTTGTTCTATAGTCTGATTCCTCCCGTGTTCAACCCTGTGATCTACTTCTTCAGGACCAAAGAAATCAAACAGAGTTTGGTCAGAAGGTTCAGAGGCAGACAGATTCACATCCAGAGAGCCAACATCACTGCTGTTTGCAGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU14434 lncRNA downstream 16079 9695773 ~ 9696054 (-) True G11662
TU14430 lncRNA downstream 117180 9589735 ~ 9594953 (-) True G11658
TU14420 lncRNA downstream 168390 9543508 ~ 9543743 (-) True G11650
TU14398 lncRNA downstream 213380 9496191 ~ 9498753 (-) True G11633
TU14447 lncRNA upstream 255459 9968577 ~ 9968783 (-) True G11675
TU14449 lncRNA upstream 277489 9990607 ~ 9991140 (-) True G11677
TU14452 lncRNA upstream 301082 10014200 ~ 10014451 (-) True G11680
TU14460 lncRNA upstream 524377 10237495 ~ 10237800 (-) True G11688
TU14471 lncRNA upstream 615601 10328719 ~ 10329089 (-) True G11699
AMCG00016166 mRNA downstream 135 9707271 ~ 9711998 (-) True AMCG00016166
AMCG00016161 mRNA downstream 26979 9684166 ~ 9685154 (-) True AMCG00016161
AMCG00016162 mRNA downstream 28135 9675938 ~ 9683998 (-) True AMCG00016162
AMCG00016147 mRNA downstream 222515 9478790 ~ 9489618 (-) True AMCG00016147
AMCG00016150 mRNA downstream 236615 9468346 ~ 9475518 (-) True AMCG00016150
AMCG00016165 mRNA upstream 54097 9767215 ~ 9767922 (-) True AMCG00016165
AMCG00016169 mRNA upstream 120220 9833338 ~ 9834282 (-) True AMCG00016169
AMCG00016167 mRNA upstream 150153 9863271 ~ 9872425 (-) True AMCG00016167
AMCG00016172 mRNA upstream 190925 9904043 ~ 9904942 (-) True AMCG00016172
AMCG00016171 mRNA upstream 191845 9904963 ~ 9919774 (-) True AMCG00016171
TU14024 other downstream 1517701 8191546 ~ 8194432 (-) False G11326
TU13237 other downstream 5791709 3907759 ~ 3920424 (-) False AMCG00016049
TU13149 other downstream 6172940 3529252 ~ 3539193 (-) False AMCG00016046
TU13017 other downstream 6676950 3034422 ~ 3035183 (-) True G10478
TU12954 other downstream 7001448 2710399 ~ 2710685 (-) True G10420
TU14520 other upstream 1133716 10846834 ~ 10847811 (-) True AMCG00016176
TU14519 other upstream 1133813 10846931 ~ 10847811 (-) False AMCG00016176
TU14856 other upstream 2610043 12323161 ~ 12329033 (-) True AMCG00016211
TU15028 other upstream 3148981 12862099 ~ 12870560 (-) False AMCG00016226
TU15029 other upstream 3148981 12862099 ~ 12862870 (-) False AMCG00016226