RNA id: AMCG00016182



Basic Information


Item Value
RNA id AMCG00016182
length 278
RNA type mRNA
GC content 0.38
exon number 2
gene id AMCG00016182
representative True

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 11369362 ~ 11370140 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCTTTCTGTGGGACATCGCCATGGATAACCTCTCTTCTGAAGTCTCAACTGTTTTAACCATGGAAGGCCTTGCTATACCACCTGAAGACACCACTTTAAATAACATCTATGGGTTGTTTATAATAGTTTCAGTGCAAGTGGTATTTGTAAGTGCTGTTTTCTATACATACCTTCAGATTTTATTGACATGTCTGAAGAACAAGCAGTCTGATGCAAAGAGCAAGGCTATACAGACTTGTGTCAGCCATTTAATGGTGTTTATCATTTTAGAACTGACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU14580 lncRNA upstream 61005 11308118 ~ 11308357 (+) True G11798
TU14573 lncRNA upstream 128558 11237358 ~ 11240804 (+) True G11792
TU14559 lncRNA upstream 181280 11186392 ~ 11188082 (+) True G11778
TU14555 lncRNA upstream 224657 11144493 ~ 11144705 (+) True G11774
TU14540 lncRNA upstream 366716 11001450 ~ 11002646 (+) True G11761
TU14597 lncRNA downstream 113422 11483562 ~ 11483793 (+) True G11813
TU14639 lncRNA downstream 347943 11718083 ~ 11719651 (+) True G11846
TU14640 lncRNA downstream 349639 11719779 ~ 11720408 (+) True G11847
TU14641 lncRNA downstream 351928 11722068 ~ 11722558 (+) True G11848
TU14642 lncRNA downstream 353057 11723197 ~ 11723601 (+) True G11849
AMCG00016181 mRNA upstream 117244 11251147 ~ 11252118 (+) True AMCG00016181
AMCG00016174 mRNA upstream 411330 10844127 ~ 10958032 (+) True AMCG00016174
AMCG00016175 mRNA upstream 526903 10834329 ~ 10842459 (+) True AMCG00016175
AMCG00016170 mRNA upstream 1555604 9812815 ~ 9813758 (+) True AMCG00016170
AMCG00016168 mRNA upstream 1571665 9791314 ~ 9797697 (+) True AMCG00016168
AMCG00016180 mRNA downstream 19669 11389809 ~ 11390312 (+) True AMCG00016180
AMCG00016184 mRNA downstream 145616 11515756 ~ 11530359 (+) True AMCG00016184
AMCG00016186 mRNA downstream 257553 11627693 ~ 11643410 (+) True AMCG00016186
AMCG00016190 mRNA downstream 310660 11680800 ~ 11717040 (+) True AMCG00016190
AMCG00016193 mRNA downstream 363738 11733878 ~ 11741377 (+) True AMCG00016193
TU14432 other upstream 1770206 9598815 ~ 9599156 (+) True G11660
TU14381 other upstream 1777713 9559464 ~ 9591649 (+) True AMCG00016159
TU14288 other upstream 2143117 9223412 ~ 9226245 (+) True G11545
TU14242 other upstream 2269326 9099420 ~ 9100036 (+) True G11509
TU14219 other upstream 2297340 9068281 ~ 9072022 (+) False AMCG00016136
TU14724 other downstream 498685 11868825 ~ 11871735 (+) True G11921
TU14996 other downstream 1408084 12778224 ~ 12781864 (+) False AMCG00016221
TU15233 other downstream 2251739 13621879 ~ 13627711 (+) True G12348
TU15235 other downstream 2261145 13631285 ~ 13631797 (+) True G12349
TU15237 other downstream 2265302 13635442 ~ 13637001 (+) True G12351

Expression Profile