RNA id: AMCG00016185


Basic Information

Item Value
RNA id AMCG00016185
length 272
RNA type mRNA
GC content 0.42
exon number 2
gene id AMCG00016185
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 11444355 ~ 11445310 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTTTTCTGTGGGACATCGCCATGGATAACCTCTCTTCTGAAGTCTCAACTGTATTAACCATGGAAGGCCTTGCTATACCACCTGAAGAACTGACAGGTCTGATGACACTTCTTTCATATCGTTTTGAGAAGGCTTCACCCCAGTTAAGGAAAATAGTTGGTATGTTTGCCATAATATTTCCCCCCACTATGAACCCAATTATTTATGGCCTGAAAATGAAAGAGATCCGGAGTAAAATACCAATGTTTTTCCGTCGGAAGGTTTCAGCCTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU14589 lncRNA downstream 43937 11400207 ~ 11400418 (-) True G11807
TU14587 lncRNA downstream 56230 11387731 ~ 11388125 (-) True G11805
TU14583 lncRNA downstream 102906 11340870 ~ 11341449 (-) True G11801
TU14537 lncRNA downstream 465961 10978183 ~ 10978394 (-) True G11759
TU14532 lncRNA downstream 500581 10943526 ~ 10943774 (-) True G11754
TU14598 lncRNA upstream 38252 11483562 ~ 11483793 (-) True G11814
TU14652 lncRNA upstream 256281 11701591 ~ 11717417 (-) False G11858
TU14651 lncRNA upstream 265974 11711284 ~ 11717417 (-) True G11858
TU14659 lncRNA upstream 293035 11738345 ~ 11738599 (-) True G11865
TU14679 lncRNA upstream 320842 11766152 ~ 11766577 (-) False AMCG00016194
AMCG00016179 mRNA downstream 206839 11224456 ~ 11237516 (-) True AMCG00016179
AMCG00016177 mRNA downstream 317617 11034266 ~ 11126738 (-) True AMCG00016177
AMCG00016178 mRNA downstream 410092 11001740 ~ 11034263 (-) True AMCG00016178
AMCG00016176 mRNA downstream 596820 10834412 ~ 10847535 (-) False AMCG00016176
AMCG00016173 mRNA downstream 1326136 10075455 ~ 10118219 (-) True AMCG00016173
AMCG00016183 mRNA upstream 26416 11471726 ~ 11475792 (-) True AMCG00016183
AMCG00016189 mRNA upstream 138504 11583814 ~ 11591097 (-) True AMCG00016189
AMCG00016188 mRNA upstream 159507 11604817 ~ 11623059 (-) True AMCG00016188
AMCG00016187 mRNA upstream 202421 11647731 ~ 11662835 (-) True AMCG00016187
AMCG00016195 mRNA upstream 274105 11719415 ~ 11729797 (-) True AMCG00016195
TU14520 other downstream 596544 10846834 ~ 10847811 (-) True AMCG00016176
TU14519 other downstream 596544 10846931 ~ 10847811 (-) False AMCG00016176
TU14024 other downstream 3249923 8191546 ~ 8194432 (-) False G11326
TU13237 other downstream 7523931 3907759 ~ 3920424 (-) False AMCG00016049
TU13149 other downstream 7905162 3529252 ~ 3539193 (-) False AMCG00016046
TU14856 other upstream 877851 12323161 ~ 12329033 (-) True AMCG00016211
TU15028 other upstream 1416789 12862099 ~ 12870560 (-) False AMCG00016226
TU15029 other upstream 1416789 12862099 ~ 12862870 (-) False AMCG00016226
TU15027 other upstream 1424530 12869840 ~ 12870560 (-) False AMCG00016226
TU15220 other upstream 2109275 13554585 ~ 13559184 (-) False AMCG00016246

Expression Profile