Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00016220 |
| length | 1833 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 8 |
| gene id | AMCG00016220 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 12682272 ~ 12691799 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0019538 | protein metabolic process | biological_process |
| GO:0043603 | cellular amide metabolic process | biological_process |
| GO:0043604 | amide biosynthetic process | biological_process |
| GO:1901564 | organonitrogen compound metabolic process | biological_process |
| GO:1901566 | organonitrogen compound biosynthetic process | biological_process |
| GO:0009058 | biosynthetic process | biological_process |
| GO:0009059 | macromolecule biosynthetic process | biological_process |
| GO:0043043 | peptide biosynthetic process | biological_process |
| GO:1901576 | organic substance biosynthetic process | biological_process |
| GO:0006412 | translation | biological_process |
| GO:0010467 | gene expression | biological_process |
| GO:0044237 | cellular metabolic process | biological_process |
| GO:0044238 | primary metabolic process | biological_process |
| GO:0044249 | cellular biosynthetic process | biological_process |
| GO:0044260 | cellular macromolecule metabolic process | biological_process |
| GO:0044267 | cellular protein metabolic process | biological_process |
| GO:0044271 | cellular nitrogen compound biosynthetic process | biological_process |
| GO:0071704 | organic substance metabolic process | biological_process |
| GO:0006518 | peptide metabolic process | biological_process |
| GO:0043170 | macromolecule metabolic process | biological_process |
| GO:0009987 | cellular process | biological_process |
| GO:0006807 | nitrogen compound metabolic process | biological_process |
| GO:0034641 | cellular nitrogen compound metabolic process | biological_process |
| GO:0034645 | cellular macromolecule biosynthetic process | biological_process |
| GO:0044391 | ribosomal subunit | cellular_component |
| GO:1990904 | ribonucleoprotein complex | cellular_component |
| GO:0022626 | cytosolic ribosome | cellular_component |
| GO:0022627 | cytosolic small ribosomal subunit | cellular_component |
| GO:0044445 | obsolete cytosolic part | cellular_component |
| GO:0005840 | ribosome | cellular_component |
| GO:0015935 | small ribosomal subunit | cellular_component |
| id | description |
|---|---|
| ko03010 | Ribosome |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU14906 | lncRNA | upstream | 221989 | 12435136 ~ 12460283 (+) | False | AMCG00016213 |
| TU14866 | lncRNA | upstream | 307163 | 12374748 ~ 12375109 (+) | True | G12043 |
| TU14865 | lncRNA | upstream | 326903 | 12354675 ~ 12355369 (+) | True | G12042 |
| TU14859 | lncRNA | upstream | 349160 | 12332136 ~ 12333112 (+) | True | G12036 |
| TU14855 | lncRNA | upstream | 353879 | 12323177 ~ 12328393 (+) | False | G12032 |
| TU15039 | lncRNA | downstream | 211553 | 12903352 ~ 12903574 (+) | True | G12183 |
| TU15068 | lncRNA | downstream | 286479 | 12978278 ~ 12979516 (+) | True | G12209 |
| TU15082 | lncRNA | downstream | 350443 | 13042242 ~ 13100583 (+) | True | G12214 |
| TU15087 | lncRNA | downstream | 373420 | 13065219 ~ 13065938 (+) | True | G12217 |
| TU15090 | lncRNA | downstream | 379772 | 13071571 ~ 13073752 (+) | True | G12220 |
| AMCG00016218 | mRNA | upstream | 3228 | 12666183 ~ 12679044 (+) | True | AMCG00016218 |
| AMCG00016213 | mRNA | upstream | 221007 | 12441932 ~ 12461265 (+) | True | AMCG00016213 |
| AMCG00016214 | mRNA | upstream | 274980 | 12400829 ~ 12407292 (+) | True | AMCG00016214 |
| AMCG00016215 | mRNA | upstream | 285219 | 12385978 ~ 12397053 (+) | True | AMCG00016215 |
| AMCG00016207 | mRNA | upstream | 421130 | 12241643 ~ 12261142 (+) | True | AMCG00016207 |
| AMCG00016221 | mRNA | downstream | 86554 | 12778353 ~ 12786899 (+) | True | AMCG00016221 |
| AMCG00016229 | mRNA | downstream | 193827 | 12885626 ~ 12890771 (+) | True | AMCG00016229 |
| AMCG00016230 | mRNA | downstream | 268249 | 12960048 ~ 12973547 (+) | True | AMCG00016230 |
| AMCG00016237 | mRNA | downstream | 329184 | 13020983 ~ 13021201 (+) | True | AMCG00016237 |
| AMCG00016231 | mRNA | downstream | 345383 | 13037182 ~ 13063508 (+) | True | AMCG00016231 |
| TU14724 | other | upstream | 810537 | 11868825 ~ 11871735 (+) | True | G11921 |
| TU14432 | other | upstream | 3083116 | 9598815 ~ 9599156 (+) | True | G11660 |
| TU14381 | other | upstream | 3090623 | 9559464 ~ 9591649 (+) | True | AMCG00016159 |
| TU14288 | other | upstream | 3456027 | 9223412 ~ 9226245 (+) | True | G11545 |
| TU14242 | other | upstream | 3582236 | 9099420 ~ 9100036 (+) | True | G11509 |
| TU14996 | other | downstream | 86425 | 12778224 ~ 12781864 (+) | False | AMCG00016221 |
| TU15233 | other | downstream | 930080 | 13621879 ~ 13627711 (+) | True | G12348 |
| TU15235 | other | downstream | 939486 | 13631285 ~ 13631797 (+) | True | G12349 |
| TU15237 | other | downstream | 943643 | 13635442 ~ 13637001 (+) | True | G12351 |
| TU15538 | other | downstream | 1745972 | 14437771 ~ 14438606 (+) | True | G12587 |
