Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00016376 |
| length | 1158 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 3 |
| gene id | AMCG00016376 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 17538034 ~ 17541342 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:1990351 | transporter complex | cellular_component |
| GO:0034702 | ion channel complex | cellular_component |
| GO:0034703 | cation channel complex | cellular_component |
| GO:0034704 | calcium channel complex | cellular_component |
| GO:0005891 | voltage-gated calcium channel complex | cellular_component |
| GO:1902495 | transmembrane transporter complex | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU16264 | lncRNA | downstream | 41691 | 17495923 ~ 17496347 (-) | True | G13129 |
| TU16261 | lncRNA | downstream | 43692 | 17493855 ~ 17494346 (-) | True | G13126 |
| TU16213 | lncRNA | downstream | 160499 | 17375266 ~ 17377539 (-) | True | G13091 |
| TU16181 | lncRNA | downstream | 251209 | 17284403 ~ 17286829 (-) | True | G13065 |
| TU16168 | lncRNA | downstream | 271903 | 17263601 ~ 17266135 (-) | False | AMCG00016360 |
| TU16425 | lncRNA | upstream | 621445 | 18162787 ~ 18165770 (-) | True | G13254 |
| TU16520 | lncRNA | upstream | 1284852 | 18826194 ~ 18901976 (-) | True | G13334 |
| TU16525 | lncRNA | upstream | 1517063 | 19058405 ~ 19058673 (-) | True | G13339 |
| TU16528 | lncRNA | upstream | 1536026 | 19077368 ~ 19077823 (-) | True | G13341 |
| TU16555 | lncRNA | upstream | 1546882 | 19088224 ~ 19088632 (-) | True | G13366 |
| AMCG00016374 | mRNA | downstream | 31595 | 17503880 ~ 17506443 (-) | True | AMCG00016374 |
| AMCG00016375 | mRNA | downstream | 47619 | 17475418 ~ 17490419 (-) | True | AMCG00016375 |
| AMCG00016369 | mRNA | downstream | 65107 | 17466683 ~ 17472931 (-) | True | AMCG00016369 |
| AMCG00016367 | mRNA | downstream | 77552 | 17427504 ~ 17460486 (-) | True | AMCG00016367 |
| AMCG00016368 | mRNA | downstream | 124438 | 17380431 ~ 17413600 (-) | True | AMCG00016368 |
| AMCG00016381 | mRNA | upstream | 136788 | 17678130 ~ 17686737 (-) | True | AMCG00016381 |
| AMCG00016384 | mRNA | upstream | 155587 | 17696929 ~ 17704385 (-) | True | AMCG00016384 |
| AMCG00016385 | mRNA | upstream | 174426 | 17715768 ~ 17716983 (-) | True | AMCG00016385 |
| AMCG00016383 | mRNA | upstream | 199290 | 17740632 ~ 17748750 (-) | True | AMCG00016383 |
| AMCG00016382 | mRNA | upstream | 244516 | 17785858 ~ 17787095 (-) | True | AMCG00016382 |
| TU16024 | other | downstream | 676859 | 16858541 ~ 16861179 (-) | True | G12945 |
| TU16025 | other | downstream | 676859 | 16858541 ~ 16861179 (-) | False | G12945 |
| TU16027 | other | downstream | 676859 | 16858541 ~ 16861179 (-) | False | G12945 |
| TU15638 | other | downstream | 2746069 | 14790203 ~ 14791969 (-) | False | AMCG00016293 |
| TU15220 | other | downstream | 3978854 | 13554585 ~ 13559184 (-) | False | AMCG00016246 |
| TU16556 | other | upstream | 1549897 | 19091239 ~ 19105381 (-) | True | G13367 |
| TU16905 | other | upstream | 2593855 | 20135197 ~ 20135547 (-) | False | AMCG00016453 |
| TU17287 | other | upstream | 5913750 | 23455092 ~ 23455811 (-) | True | G13962 |
| TU17295 | other | upstream | 6157807 | 23699149 ~ 23700255 (-) | True | G13969 |
| TU17551 | other | upstream | 6769695 | 24311037 ~ 24316802 (-) | False | AMCG00016531 |
