Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00016387 |
| length | 741 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 4 |
| gene id | AMCG00016387 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 17875444 ~ 17887736 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| K05450 | PDGFC_D; platelet derived growth factor C/D |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU16327 | lncRNA | upstream | 194535 | 17658757 ~ 17680909 (+) | False | G13174 |
| TU16325 | lncRNA | upstream | 194535 | 17678127 ~ 17680909 (+) | True | G13174 |
| TU16326 | lncRNA | upstream | 194535 | 17678127 ~ 17680909 (+) | False | G13174 |
| TU16296 | lncRNA | upstream | 275863 | 17597350 ~ 17599581 (+) | False | AMCG00016379 |
| TU16123 | lncRNA | upstream | 728446 | 17143610 ~ 17146998 (+) | True | G13021 |
| TU16441 | lncRNA | downstream | 371532 | 18259268 ~ 18259834 (+) | False | G13266 |
| TU16438 | lncRNA | downstream | 371805 | 18259541 ~ 18262343 (+) | True | G13266 |
| TU16442 | lncRNA | downstream | 377466 | 18265202 ~ 18265406 (+) | True | G13267 |
| TU16445 | lncRNA | downstream | 382297 | 18270033 ~ 18274439 (+) | True | G13270 |
| TU16448 | lncRNA | downstream | 400304 | 18288040 ~ 18288261 (+) | True | G13273 |
| AMCG00016386 | mRNA | upstream | 184184 | 17686856 ~ 17691260 (+) | True | AMCG00016386 |
| AMCG00016377 | mRNA | upstream | 237024 | 17624138 ~ 17638420 (+) | True | AMCG00016377 |
| AMCG00016380 | mRNA | upstream | 264284 | 17603723 ~ 17611160 (+) | True | AMCG00016380 |
| AMCG00016379 | mRNA | upstream | 275865 | 17562418 ~ 17599579 (+) | True | AMCG00016379 |
| AMCG00016378 | mRNA | upstream | 315645 | 17538087 ~ 17559799 (+) | True | AMCG00016378 |
| AMCG00016388 | mRNA | downstream | 194186 | 18081922 ~ 18085103 (+) | True | AMCG00016388 |
| AMCG00016394 | mRNA | downstream | 210275 | 18098011 ~ 18100803 (+) | True | AMCG00016394 |
| AMCG00016393 | mRNA | downstream | 269971 | 18157707 ~ 18165129 (+) | True | AMCG00016393 |
| AMCG00016397 | mRNA | downstream | 477002 | 18364738 ~ 18370387 (+) | True | AMCG00016397 |
| AMCG00016407 | mRNA | downstream | 531281 | 18419017 ~ 18429096 (+) | True | AMCG00016407 |
| TU16114 | other | upstream | 753512 | 17116793 ~ 17121932 (+) | True | G13012 |
| TU15937 | other | upstream | 1389441 | 16484355 ~ 16486003 (+) | True | AMCG00016329 |
| TU15942 | other | upstream | 1389441 | 16484355 ~ 16486003 (+) | False | AMCG00016329 |
| TU15938 | other | upstream | 1390296 | 16484355 ~ 16485148 (+) | False | AMCG00016329 |
| TU15538 | other | upstream | 3436838 | 14437771 ~ 14438606 (+) | True | G12587 |
| TU17415 | other | downstream | 6192281 | 24080017 ~ 24110182 (+) | False | G14057 |
| TU17581 | other | downstream | 6647282 | 24535018 ~ 24561807 (+) | False | AMCG00016537 |
| TU17758 | other | downstream | 7120226 | 25007962 ~ 25010687 (+) | True | G14326 |
| TU17806 | other | downstream | 7245462 | 25133198 ~ 25133879 (+) | True | G14361 |
| TU17809 | other | downstream | 7262747 | 25150483 ~ 25157461 (+) | False | AMCG00016566 |
