Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00016389 |
| length | 1044 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 8 |
| gene id | AMCG00016389 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 17985431 ~ 18004633 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0001539 | cilium or flagellum-dependent cell motility | biological_process |
| GO:0007018 | microtubule-based movement | biological_process |
| GO:0006200 | obsolete ATP catabolic process | biological_process |
| GO:0030031 | cell projection assembly | biological_process |
| GO:0030286 | dynein complex | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0003777 | microtubule motor activity | molecular_function |
| GO:0016887 | ATPase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU16302 | lncRNA | downstream | 445086 | 17538034 ~ 17540345 (-) | False | AMCG00016376 |
| TU16264 | lncRNA | downstream | 489084 | 17495923 ~ 17496347 (-) | True | G13129 |
| TU16261 | lncRNA | downstream | 491085 | 17493855 ~ 17494346 (-) | True | G13126 |
| TU16213 | lncRNA | downstream | 607892 | 17375266 ~ 17377539 (-) | True | G13091 |
| TU16181 | lncRNA | downstream | 698602 | 17284403 ~ 17286829 (-) | True | G13065 |
| TU16425 | lncRNA | upstream | 158154 | 18162787 ~ 18165770 (-) | True | G13254 |
| TU16520 | lncRNA | upstream | 821561 | 18826194 ~ 18901976 (-) | True | G13334 |
| TU16525 | lncRNA | upstream | 1053772 | 19058405 ~ 19058673 (-) | True | G13339 |
| TU16528 | lncRNA | upstream | 1072735 | 19077368 ~ 19077823 (-) | True | G13341 |
| TU16555 | lncRNA | upstream | 1083591 | 19088224 ~ 19088632 (-) | True | G13366 |
| AMCG00016390 | mRNA | downstream | 37295 | 17935136 ~ 17948136 (-) | True | AMCG00016390 |
| AMCG00016382 | mRNA | downstream | 198336 | 17785858 ~ 17787095 (-) | True | AMCG00016382 |
| AMCG00016383 | mRNA | downstream | 236681 | 17740632 ~ 17748750 (-) | True | AMCG00016383 |
| AMCG00016385 | mRNA | downstream | 268448 | 17715768 ~ 17716983 (-) | True | AMCG00016385 |
| AMCG00016384 | mRNA | downstream | 281046 | 17696929 ~ 17704385 (-) | True | AMCG00016384 |
| AMCG00016391 | mRNA | upstream | 15406 | 18020039 ~ 18069565 (-) | True | AMCG00016391 |
| AMCG00016392 | mRNA | upstream | 82134 | 18086767 ~ 18091557 (-) | True | AMCG00016392 |
| AMCG00016395 | mRNA | upstream | 224478 | 18229111 ~ 18242329 (-) | True | AMCG00016395 |
| AMCG00016396 | mRNA | upstream | 254527 | 18259160 ~ 18262198 (-) | True | AMCG00016396 |
| AMCG00016398 | mRNA | upstream | 269597 | 18274230 ~ 18292859 (-) | True | AMCG00016398 |
| TU16024 | other | downstream | 1124252 | 16858541 ~ 16861179 (-) | True | G12945 |
| TU16025 | other | downstream | 1124252 | 16858541 ~ 16861179 (-) | False | G12945 |
| TU16027 | other | downstream | 1124252 | 16858541 ~ 16861179 (-) | False | G12945 |
| TU15638 | other | downstream | 3193462 | 14790203 ~ 14791969 (-) | False | AMCG00016293 |
| TU15220 | other | downstream | 4426247 | 13554585 ~ 13559184 (-) | False | AMCG00016246 |
| TU16556 | other | upstream | 1086606 | 19091239 ~ 19105381 (-) | True | G13367 |
| TU16905 | other | upstream | 2130564 | 20135197 ~ 20135547 (-) | False | AMCG00016453 |
| TU17287 | other | upstream | 5450459 | 23455092 ~ 23455811 (-) | True | G13962 |
| TU17295 | other | upstream | 5694516 | 23699149 ~ 23700255 (-) | True | G13969 |
| TU17551 | other | upstream | 6306404 | 24311037 ~ 24316802 (-) | False | AMCG00016531 |
