Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00016395 |
| length | 1305 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 3 |
| gene id | AMCG00016395 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 18229111 ~ 18242329 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0015031 | protein transport | biological_process |
| GO:0005525 | GTP binding | molecular_function |
| id | description |
|---|---|
| K07923 | RAB38; Ras-related protein Rab-38 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU16425 | lncRNA | downstream | 63341 | 18162787 ~ 18165770 (-) | True | G13254 |
| TU16302 | lncRNA | downstream | 688766 | 17538034 ~ 17540345 (-) | False | AMCG00016376 |
| TU16264 | lncRNA | downstream | 732764 | 17495923 ~ 17496347 (-) | True | G13129 |
| TU16261 | lncRNA | downstream | 734765 | 17493855 ~ 17494346 (-) | True | G13126 |
| TU16213 | lncRNA | downstream | 851572 | 17375266 ~ 17377539 (-) | True | G13091 |
| TU16520 | lncRNA | upstream | 583865 | 18826194 ~ 18901976 (-) | True | G13334 |
| TU16525 | lncRNA | upstream | 816076 | 19058405 ~ 19058673 (-) | True | G13339 |
| TU16528 | lncRNA | upstream | 835039 | 19077368 ~ 19077823 (-) | True | G13341 |
| TU16555 | lncRNA | upstream | 845895 | 19088224 ~ 19088632 (-) | True | G13366 |
| TU16588 | lncRNA | upstream | 923257 | 19165586 ~ 19253414 (-) | True | G13392 |
| AMCG00016392 | mRNA | downstream | 137554 | 18086767 ~ 18091557 (-) | True | AMCG00016392 |
| AMCG00016391 | mRNA | downstream | 159546 | 18020039 ~ 18069565 (-) | True | AMCG00016391 |
| AMCG00016389 | mRNA | downstream | 224478 | 17985431 ~ 18004633 (-) | True | AMCG00016389 |
| AMCG00016390 | mRNA | downstream | 280975 | 17935136 ~ 17948136 (-) | True | AMCG00016390 |
| AMCG00016382 | mRNA | downstream | 442016 | 17785858 ~ 17787095 (-) | True | AMCG00016382 |
| AMCG00016396 | mRNA | upstream | 16831 | 18259160 ~ 18262198 (-) | True | AMCG00016396 |
| AMCG00016398 | mRNA | upstream | 31901 | 18274230 ~ 18292859 (-) | True | AMCG00016398 |
| AMCG00016399 | mRNA | upstream | 87864 | 18330193 ~ 18349377 (-) | True | AMCG00016399 |
| AMCG00016400 | mRNA | upstream | 138135 | 18380464 ~ 18399758 (-) | True | AMCG00016400 |
| AMCG00016401 | mRNA | upstream | 178424 | 18420753 ~ 18436028 (-) | True | AMCG00016401 |
| TU16024 | other | downstream | 1367932 | 16858541 ~ 16861179 (-) | True | G12945 |
| TU16025 | other | downstream | 1367932 | 16858541 ~ 16861179 (-) | False | G12945 |
| TU16027 | other | downstream | 1367932 | 16858541 ~ 16861179 (-) | False | G12945 |
| TU15638 | other | downstream | 3437142 | 14790203 ~ 14791969 (-) | False | AMCG00016293 |
| TU15220 | other | downstream | 4669927 | 13554585 ~ 13559184 (-) | False | AMCG00016246 |
| TU16556 | other | upstream | 848910 | 19091239 ~ 19105381 (-) | True | G13367 |
| TU16905 | other | upstream | 1892868 | 20135197 ~ 20135547 (-) | False | AMCG00016453 |
| TU17287 | other | upstream | 5212763 | 23455092 ~ 23455811 (-) | True | G13962 |
| TU17295 | other | upstream | 5456820 | 23699149 ~ 23700255 (-) | True | G13969 |
| TU17551 | other | upstream | 6068708 | 24311037 ~ 24316802 (-) | False | AMCG00016531 |
