Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00016421 |
| length | 1128 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 1 |
| gene id | AMCG00016421 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 19324580 ~ 19325707 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016740 | transferase activity | molecular_function |
| id | description |
|---|---|
| K07632 | FUT4; galactoside alpha-1,3-fucosyltransferase 4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU16617 | lncRNA | upstream | 62168 | 19262099 ~ 19262412 (+) | True | G13415 |
| TU16613 | lncRNA | upstream | 68648 | 19255725 ~ 19255932 (+) | True | G13411 |
| TU16553 | lncRNA | upstream | 162768 | 19161582 ~ 19161812 (+) | True | G13364 |
| TU16530 | lncRNA | upstream | 219052 | 19091241 ~ 19105528 (+) | True | G13342 |
| TU16666 | lncRNA | downstream | 52293 | 19378000 ~ 19442114 (+) | True | G13458 |
| TU16699 | lncRNA | downstream | 132342 | 19458049 ~ 19462968 (+) | True | G13490 |
| TU16700 | lncRNA | downstream | 137774 | 19463481 ~ 19463953 (+) | True | G13491 |
| TU16702 | lncRNA | downstream | 142873 | 19468580 ~ 19468788 (+) | True | G13493 |
| TU16703 | lncRNA | downstream | 143928 | 19469635 ~ 19470098 (+) | True | G13494 |
| AMCG00016415 | mRNA | upstream | 2299 | 19316828 ~ 19322281 (+) | True | AMCG00016415 |
| AMCG00016416 | mRNA | upstream | 72726 | 19239187 ~ 19251854 (+) | True | AMCG00016416 |
| AMCG00016413 | mRNA | upstream | 87487 | 19224261 ~ 19237093 (+) | True | AMCG00016413 |
| AMCG00016406 | mRNA | upstream | 170820 | 19146360 ~ 19153760 (+) | True | AMCG00016406 |
| AMCG00016408 | mRNA | upstream | 233952 | 18791923 ~ 19090628 (+) | True | AMCG00016408 |
| AMCG00016417 | mRNA | downstream | 14119 | 19339826 ~ 19362470 (+) | True | AMCG00016417 |
| AMCG00016422 | mRNA | downstream | 112886 | 19438593 ~ 19444885 (+) | True | AMCG00016422 |
| AMCG00016432 | mRNA | downstream | 432620 | 19758327 ~ 19799814 (+) | True | AMCG00016432 |
| AMCG00016430 | mRNA | downstream | 485695 | 19811402 ~ 19814610 (+) | True | AMCG00016430 |
| AMCG00016431 | mRNA | downstream | 540571 | 19866278 ~ 19869018 (+) | True | AMCG00016431 |
| TU16114 | other | upstream | 2202648 | 17116793 ~ 17121932 (+) | True | G13012 |
| TU15937 | other | upstream | 2838577 | 16484355 ~ 16486003 (+) | True | AMCG00016329 |
| TU15942 | other | upstream | 2838577 | 16484355 ~ 16486003 (+) | False | AMCG00016329 |
| TU15938 | other | upstream | 2839432 | 16484355 ~ 16485148 (+) | False | AMCG00016329 |
| TU15538 | other | upstream | 4885974 | 14437771 ~ 14438606 (+) | True | G12587 |
| TU17415 | other | downstream | 4754310 | 24080017 ~ 24110182 (+) | False | G14057 |
| TU17581 | other | downstream | 5209311 | 24535018 ~ 24561807 (+) | False | AMCG00016537 |
| TU17758 | other | downstream | 5682255 | 25007962 ~ 25010687 (+) | True | G14326 |
| TU17806 | other | downstream | 5807491 | 25133198 ~ 25133879 (+) | True | G14361 |
| TU17809 | other | downstream | 5824776 | 25150483 ~ 25157461 (+) | False | AMCG00016566 |
